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2G54
Biol. Unit 1
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Asym.Unit (344 KB)
Biol.Unit 1 (173 KB)
Biol.Unit 2 (170 KB)
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Title
:
CRYSTAL STRUCTURE OF ZN-BOUND HUMAN INSULIN-DEGRADING ENZYME IN COMPLEX WITH INSULIN B CHAIN
Authors
:
Y. Shen, W. -J. Tang
Date
:
22 Feb 06 (Deposition) - 24 Oct 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Protein-Peptide Complex, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
Y. Shen, A. Joachimiak, M. R. Rosner, W. J. Tang
Structures Of Human Insulin-Degrading Enzyme Reveal A New Substrate Recognition Mechanism.
Nature V. 443 870 2006
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 1,4-DIETHYLENE DIOXIDE (DIOa)
1b: 1,4-DIETHYLENE DIOXIDE (DIOb)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
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Select:
Label:
No.
Name
Count
Type
Full Name
1
DIO
1
Ligand/Ion
1,4-DIETHYLENE DIOXIDE
2
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(2, 2)
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All Sites
1: AC1 (SOFTWARE)
2: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:108 , HIS A:112 , GLU A:189 , TYR C:16
BINDING SITE FOR RESIDUE ZN A 1100
2
AC3
SOFTWARE
LEU A:204 , GLU A:205 , ARG A:477 , ALA A:479
BINDING SITE FOR RESIDUE DIO A 2000
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_063724 (H5D, chain C, )
2: VAR_063728 (C19G, chain C, )
3: VAR_051571 (E612K, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_063724
H
29
D
INS_HUMAN
Disease (PNDM)
121908272
C
H
5
D
2
UniProt
VAR_063728
C
43
G
INS_HUMAN
Disease (PNDM)
80356666
C
C
19
G
3
UniProt
VAR_051571
E
612
K
IDE_HUMAN
Polymorphism
2229708
A
E
612
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: INSULINASE (A:95-118)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
INSULINASE
PS00143
Insulinase family, zinc-binding region signature.
IDE_HUMAN
95-118
1
A:95-118
-
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Exons
(0, 0)
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Asym.Unit (344 KB)
Header - Asym.Unit
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