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2G0T
Biol. Unit 1
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Asym.Unit (116 KB)
Biol.Unit 1 (108 KB)
Biol.Unit 2 (213 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A PUTATIVE NUCLEOTIDE BINDING PROTEIN (TM0796) FROM THERMOTOGA MARITIMA AT 2.67 A RESOLUTION
Authors
:
Joint Center For Structural Genomics (Jcsg)
Date
:
13 Feb 06 (Deposition) - 28 Feb 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.67
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (2x)
Keywords
:
Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Phosphate-Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Hypothetical Protein (Tm0796) From Thermotoga Maritima At 2. 67 A Resolution
To Be Published
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Hetero Components
(4, 18)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
2a: FORMIC ACID (FMTa)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
4a: PHOSPHATE ION (PO4a)
4b: PHOSPHATE ION (PO4b)
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No.
Name
Count
Type
Full Name
1
EDO
3
Ligand/Ion
1,2-ETHANEDIOL
2
FMT
1
Ligand/Ion
FORMIC ACID
3
MSE
12
Mod. Amino Acid
SELENOMETHIONINE
4
PO4
2
Ligand/Ion
PHOSPHATE ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
VAL B:168 , VAL B:169 , GLY B:170 , LYS B:171 , ARG B:172 , HOH B:423
BINDING SITE FOR RESIDUE PO4 B 339
2
AC2
SOFTWARE
VAL A:168 , VAL A:169 , GLY A:170 , LYS A:171 , ARG A:172 , HOH A:364 , HOH A:380 , HOH A:400
BINDING SITE FOR RESIDUE PO4 A 339
3
AC3
SOFTWARE
LYS B:5 , GLN B:8
BINDING SITE FOR RESIDUE EDO B 340
4
AC4
SOFTWARE
GLN A:8
BINDING SITE FOR RESIDUE EDO A 340
5
AC5
SOFTWARE
ARG A:172 , GLY A:195 , THR A:197 , GLN A:241
BINDING SITE FOR RESIDUE EDO A 341
6
AC6
SOFTWARE
GLN B:177 , GLU B:180 , ARG B:181 , GLU B:184
BINDING SITE FOR RESIDUE FMT B 341
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2g0ta1 (A:1-338)
1b: SCOP_d2g0tb_ (B:)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Nitrogenase iron protein-like
(152)
Protein domain
:
Hypothetical protein TM0796
(1)
Thermotoga maritima [TaxId: 2336]
(1)
1a
d2g0ta1
A:1-338
1b
d2g0tb_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2g0tB01 (B:0-145)
1b: CATH_2g0tA01 (A:0-145)
2a: CATH_2g0tA02 (A:146-338)
2b: CATH_2g0tB02 (B:146-338)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Thermotoga maritima. Organism_taxid: 2336.
(10)
1a
2g0tB01
B:0-145
1b
2g0tA01
A:0-145
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Thermotoga maritima. Organism_taxid: 2336.
(16)
2a
2g0tA02
A:146-338
2b
2g0tB02
B:146-338
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (116 KB)
Header - Asym.Unit
Biol.Unit 1 (108 KB)
Header - Biol.Unit 1
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