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2FXA
Biol. Unit 1
Info
Asym.Unit (130 KB)
Biol.Unit 1 (65 KB)
Biol.Unit 2 (60 KB)
Biol.Unit 3 (121 KB)
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(1)
Title
:
STRUCTURE OF THE PROTEASE PRODUCTION REGULATORY PROTEIN HPR FROM BACILLUS SUBTILIS.
Authors
:
M. E. Cuff, T. Skarina, A. Edwards, A. Savchenko, A. Joachimiak, Midwes For Structural Genomics (Mcsg)
Date
:
03 Feb 06 (Deposition) - 14 Mar 06 (Release) - 09 Dec 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B,C,D (1x)
Keywords
:
Bacillus Subtilis, Hpr, Protease Porduction, Regulation, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. E. Cuff, T. Skarina, A. Edwards, A. Savchenko, A. Joachimiak
Structure Of The Protease Production Regulatory Protein Hpr From Bacillus Subtilis.
To Be Published
[
close entry info
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Hetero Components
(4, 24)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
3q: SELENOMETHIONINE (MSEq)
3r: SELENOMETHIONINE (MSEr)
3s: SELENOMETHIONINE (MSEs)
3t: SELENOMETHIONINE (MSEt)
3u: SELENOMETHIONINE (MSEu)
3v: SELENOMETHIONINE (MSEv)
3w: SELENOMETHIONINE (MSEw)
3x: SELENOMETHIONINE (MSEx)
4a: HEXAETHYLENE GLYCOL (P6Ga)
5a: TRIETHYLENE GLYCOL (PGEa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
EDO
10
Ligand/Ion
1,2-ETHANEDIOL
3
MSE
12
Mod. Amino Acid
SELENOMETHIONINE
4
P6G
1
Ligand/Ion
HEXAETHYLENE GLYCOL
5
PGE
-1
Ligand/Ion
TRIETHYLENE GLYCOL
[
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]
Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC4 (SOFTWARE)
04: AC5 (SOFTWARE)
05: AC6 (SOFTWARE)
06: AC7 (SOFTWARE)
07: BC2 (SOFTWARE)
08: BC3 (SOFTWARE)
09: BC4 (SOFTWARE)
10: BC5 (SOFTWARE)
11: BC7 (SOFTWARE)
12: BC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:164 , SER A:167 , VAL B:15 , GLN B:18 , LYS B:19 , HOH B:347
BINDING SITE FOR RESIDUE EDO B 206
02
AC2
SOFTWARE
GLU A:147 , PHE B:139 , GLU C:147 , PHE D:139
BINDING SITE FOR RESIDUE EDO A 206
03
AC4
SOFTWARE
VAL A:145 , ALA A:146 , GLU A:147 , MSE A:148 , VAL B:145 , GLU B:147 , MSE B:148
BINDING SITE FOR RESIDUE EDO A 207
04
AC5
SOFTWARE
VAL B:74 , SER B:75 , PHE B:78
BINDING SITE FOR RESIDUE EDO B 207
05
AC6
SOFTWARE
GLU A:144 , GLU C:147 , LYS D:141 , GLU D:144
BINDING SITE FOR RESIDUE EDO A 208
06
AC7
SOFTWARE
PHE A:139 , GLU B:147 , GLU D:147
BINDING SITE FOR RESIDUE EDO B 208
07
BC2
SOFTWARE
GLU A:32 , EDO A:212 , LYS B:29
BINDING SITE FOR RESIDUE EDO B 211
08
BC3
SOFTWARE
ASN A:47 , HOH A:313 , EDO B:211
BINDING SITE FOR RESIDUE EDO A 212
09
BC4
SOFTWARE
GLU A:147 , HOH A:305 , PRO B:143 , GLU B:144 , GLU C:144 , ALA C:146
BINDING SITE FOR RESIDUE EDO A 213
10
BC5
SOFTWARE
PRO A:143 , GLU A:144 , GLU B:147 , GLU D:144 , ALA D:146
BINDING SITE FOR RESIDUE EDO A 214
11
BC7
SOFTWARE
THR A:17 , GLN A:18 , ALA A:21 , TRP B:35 , TRP B:38 , TRP B:53 , GLN B:57 , GLU B:120 , ASP B:122 , ASN B:126
BINDING SITE FOR RESIDUE P6G B 302
12
BC9
SOFTWARE
TRP A:35 , TRP A:38 , PHE A:121 , ASP A:122 , ASN A:126 , HOH A:325 , HOH A:349 , GLN B:18 , GLN B:22
BINDING SITE FOR RESIDUE 1PE A 304
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: HTH_MARR_2 (A:13-157,B:13-157)
2: HTH_MARR_1 (A:76-110,B:76-110)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HTH_MARR_2
PS50995
MarR-type HTH domain profile.
HPR_BACSU
13-157
2
A:13-157
B:13-157
-
-
2
HTH_MARR_1
PS01117
MarR-type HTH domain signature.
HPR_BACSU
76-110
2
A:76-110
B:76-110
-
-
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2fxaa1 (A:6-167)
1b: SCOP_d2fxab_ (B:)
1c: SCOP_d2fxac_ (C:)
1d: SCOP_d2fxad_ (D:)
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Protein Domains
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Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
MarR-like transcriptional regulators
(34)
Protein domain
:
Protease production regulatory protein Hpr
(1)
Bacillus subtilis [TaxId: 1423]
(1)
1a
d2fxaa1
A:6-167
1b
d2fxab_
B:
1c
d2fxac_
C:
1d
d2fxad_
D:
[
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2fxaA00 (A:6-167)
1b: CATH_2fxaD00 (D:7-169)
1c: CATH_2fxaC00 (C:8-167)
1d: CATH_2fxaB00 (B:8-187)
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Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
'winged helix' repressor DNA binding domain
(507)
Bacillus subtilis. Organism_taxid: 1423.
(15)
1a
2fxaA00
A:6-167
1b
2fxaD00
D:7-169
1c
2fxaC00
C:8-167
1d
2fxaB00
B:8-187
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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Asym.Unit (130 KB)
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