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2F1T
Asym. Unit
Info
Asym.Unit (101 KB)
Biol.Unit 1 (34 KB)
Biol.Unit 2 (33 KB)
Biol.Unit 3 (33 KB)
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(1)
Title
:
OUTER MEMBRANE PROTEIN OMPW
Authors
:
B. Van Den Berg
Date
:
15 Nov 05 (Deposition) - 24 Jan 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Outer Membrane Protein, Beta Barrel, Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Hong, D. R. Patel, L. K. Tamm, B. Van Den Berg
The Outer Membrane Protein Ompw Forms An Eight-Stranded Beta-Barrel With A Hydrophobic Channel.
J. Biol. Chem. V. 281 7568 2006
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Hetero Components
(3, 14)
Info
All Hetero Components
1a: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Ea)
1b: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Eb)
1c: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Ec)
1d: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Ed)
1e: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Ee)
1f: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Ef)
1g: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Eg)
1h: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTA... (C8Eh)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
3a: LAURYL DIMETHYLAMINE-N-OXIDE (LDAa)
3b: LAURYL DIMETHYLAMINE-N-OXIDE (LDAb)
3c: LAURYL DIMETHYLAMINE-N-OXIDE (LDAc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
C8E
8
Ligand/Ion
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
2
GOL
3
Ligand/Ion
GLYCEROL
3
LDA
3
Ligand/Ion
LAURYL DIMETHYLAMINE-N-OXIDE
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:31 , ILE A:65 , LEU A:123 , LEU A:128 , VAL A:176
BINDING SITE FOR RESIDUE LDA A 301
02
AC2
SOFTWARE
PHE B:31 , LEU B:128 , ALA B:163 , TYR B:165 , LEU B:167 , VAL B:176
BINDING SITE FOR RESIDUE LDA B 302
03
AC3
SOFTWARE
PHE C:31 , ILE C:65 , VAL C:76 , PHE C:114 , LEU C:128 , TYR C:165 , VAL C:176
BINDING SITE FOR RESIDUE LDA C 303
04
AC4
SOFTWARE
MET A:8 , ALA A:10 , GLY A:11 , PHE A:185 , ALA A:187 , C8E A:402
BINDING SITE FOR RESIDUE C8E A 401
05
AC5
SOFTWARE
TRP A:148 , C8E A:401
BINDING SITE FOR RESIDUE C8E A 402
06
AC6
SOFTWARE
PHE A:96 , TYR A:142 , TYR B:156
BINDING SITE FOR RESIDUE C8E A 403
07
AC7
SOFTWARE
TYR A:142
BINDING SITE FOR RESIDUE C8E A 404
08
AC8
SOFTWARE
ALA B:10 , GLY B:11 , SER B:12 , MET C:8 , TRP C:148 , ALA C:187
BINDING SITE FOR RESIDUE C8E B 405
09
AC9
SOFTWARE
TRP B:148 , ALA B:187 , ALA C:10 , GLY C:11 , THR C:37
BINDING SITE FOR RESIDUE C8E C 406
10
BC1
SOFTWARE
PHE A:89 , PHE B:89 , GLY B:90
BINDING SITE FOR RESIDUE C8E B 408
11
BC2
SOFTWARE
GLU A:2 , GLU A:5 , PHE A:7 , ASP A:141 , LEU A:143 , ARG A:190
BINDING SITE FOR RESIDUE GOL A 200
12
BC3
SOFTWARE
GLU B:2 , GLU B:5 , PHE B:7 , ASP B:141 , LEU B:143 , ARG B:190
BINDING SITE FOR RESIDUE GOL B 201
13
BC4
SOFTWARE
GLU C:2 , GLU C:5 , PHE C:7 , MET C:46 , ASP C:141 , LEU C:143 , LEU C:149 , ARG C:190
BINDING SITE FOR RESIDUE GOL C 202
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_2f1tA00 (A:2-192)
1b: CATH_2f1tB00 (B:2-192)
1c: CATH_2f1tC00 (C:2-192)
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Classes
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Porin
(92)
Homologous Superfamily
:
[code=2.40.160.20, no name defined]
(20)
Escherichia coli k12. Organism_taxid: 83333. Strain: k-12.
(2)
1a
2f1tA00
A:2-192
1b
2f1tB00
B:2-192
1c
2f1tC00
C:2-192
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Pfam Domains
(0, 0)
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all PFAM domains
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (101 KB)
Header - Asym.Unit
Biol.Unit 1 (34 KB)
Header - Biol.Unit 1
Biol.Unit 2 (33 KB)
Header - Biol.Unit 2
Biol.Unit 3 (33 KB)
Header - Biol.Unit 3
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