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2EQU
Asym. Unit
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Asym.Unit (390 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE TUDOR DOMAIN OF PHD FINGER PROTEIN 20-LIKE 1
Authors
:
K. Futami, S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
30 Mar 07 (Deposition) - 02 Oct 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Tudor Domain, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Futami, S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama
Solution Structure Of The Tudor Domain Of Phd Finger Protein 20-Like 1
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(4, 4)
Info
All Exons
Exon 1.4 (A:78-85 (gaps))
Exon 1.5 (A:86-114)
Exon 1.6b (A:114-143)
Exon 1.7b (A:144-151)
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All Exon Boundaries
1: Boundary 1.2b/1.4
2: Boundary 1.4/1.5
3: Boundary 1.5/1.6b
4: Boundary 1.6b/1.6e
5: Boundary 1.6e/1.7b
6: Boundary 1.7b/1.8c
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000395386
1c
ENSE00001521553
chr8:
133787630-133787891
262
P20L1_HUMAN
-
0
0
-
-
1.2b
ENST00000395386
2b
ENSE00001675977
chr8:
133790038-133790157
120
P20L1_HUMAN
1-28
28
0
-
-
1.4
ENST00000395386
4
ENSE00001707399
chr8:
133806656-133806827
172
P20L1_HUMAN
28-85
58
1
A:78-85 (gaps)
25
1.5
ENST00000395386
5
ENSE00001734578
chr8:
133806979-133807063
85
P20L1_HUMAN
86-114
29
1
A:86-114
29
1.6b
ENST00000395386
6b
ENSE00001605264
chr8:
133811018-133811106
89
P20L1_HUMAN
114-143
30
1
A:114-143
30
1.6e
ENST00000395386
6e
ENSE00001090009
chr8:
133811341-133811418
78
P20L1_HUMAN
144-169
26
0
-
-
1.7b
ENST00000395386
7b
ENSE00001089992
chr8:
133816064-133816277
214
P20L1_HUMAN
170-241
72
1
A:144-151
8
1.8c
ENST00000395386
8c
ENSE00001090001
chr8:
133816860-133816985
126
P20L1_HUMAN
241-283
43
0
-
-
1.9d
ENST00000395386
9d
ENSE00002159454
chr8:
133823291-133823373
83
P20L1_HUMAN
283-310
28
0
-
-
1.10a
ENST00000395386
10a
ENSE00001731663
chr8:
133826882-133827134
253
P20L1_HUMAN
311-395
85
0
-
-
1.10d
ENST00000395386
10d
ENSE00001708692
chr8:
133829133-133829321
189
P20L1_HUMAN
395-458
64
0
-
-
1.10f
ENST00000395386
10f
ENSE00001799713
chr8:
133829584-133829790
207
P20L1_HUMAN
458-527
70
0
-
-
1.11b
ENST00000395386
11b
ENSE00002182278
chr8:
133836249-133836305
57
P20L1_HUMAN
527-546
20
0
-
-
1.11h
ENST00000395386
11h
ENSE00001613063
chr8:
133837509-133837616
108
P20L1_HUMAN
546-582
37
0
-
-
1.12
ENST00000395386
12
ENSE00001694370
chr8:
133844480-133844644
165
P20L1_HUMAN
582-637
56
0
-
-
1.13b
ENST00000395386
13b
ENSE00001666145
chr8:
133848785-133848966
182
P20L1_HUMAN
637-697
61
0
-
-
1.14a
ENST00000395386
14a
ENSE00001607526
chr8:
133849957-133850056
100
P20L1_HUMAN
698-731
34
0
-
-
1.15
ENST00000395386
15
ENSE00001772894
chr8:
133851632-133851827
196
P20L1_HUMAN
731-796
66
0
-
-
1.16b
ENST00000395386
16b
ENSE00001622971
chr8:
133854760-133855120
361
P20L1_HUMAN
796-916
121
0
-
-
1.17
ENST00000395386
17
ENSE00001616887
chr8:
133856401-133856563
163
P20L1_HUMAN
917-971
55
0
-
-
1.18c
ENST00000395386
18c
ENSE00001719560
chr8:
133858026-133861052
3027
P20L1_HUMAN
971-1017
47
0
-
-
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Chain A
Asymmetric Unit 1
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