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Asym. Unit
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Asym.Unit (393 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE FIRST LIM DOMAIN FROM HUMAN FOUR AND A HALF LIM DOMAINS PROTEIN 3
Authors
:
K. Inoue, T. Nagashima, F. Hayashi, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
06 Mar 07 (Deposition) - 11 Sep 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Lim Domain, Four And A Half Lim Domains Protein 3, Fhl-3, Skeletal Muscle Lim- Protein 2, Slim 2, Fhl3, Slim2, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Inoue, T. Nagashima, F. Hayashi, S. Yokoyama
Solution Structure Of The First Lim Domain From Human Four And A Half Lim Domains Protein 3
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
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No.
Name
Count
Type
Full Name
1
ZN
2
Ligand/Ion
ZINC ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:18 , CYS A:21 , HIS A:40 , CYS A:43
BINDING SITE FOR RESIDUE ZN A 200
2
AC2
SOFTWARE
CYS A:46 , CYS A:49 , CYS A:67 , CYS A:70
BINDING SITE FOR RESIDUE ZN A 300
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 4)
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1: LIM_DOMAIN_1 (A:18-53|A:77-78|-|-)
2: LIM_DOMAIN_2 (A:77-82|A:16-76|-|-)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LIM_DOMAIN_1
PS00478
LIM zinc-binding domain signature.
FHL3_HUMAN
40-75
101-136
162-195
221-258
2
A:18-53
A:77-78
-
-
2
LIM_DOMAIN_2
PS50023
LIM domain profile.
FHL3_HUMAN
99-160
38-98
219-280
161-218
2
A:77-82
A:16-76
-
-
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Exons
(3, 3)
Info
All Exons
Exon 1.2 (A:1-30 (gaps))
Exon 1.3a (A:31-76)
Exon 1.4 (A:77-82 (gaps))
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1: Boundary 1.1b/1.2
2: Boundary 1.2/1.3a
3: Boundary 1.3a/1.4
4: Boundary 1.4/1.5
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000373016
1b
ENSE00001917363
chr1:
38471177-38471029
149
FHL3_HUMAN
-
0
0
-
-
1.2
ENST00000373016
2
ENSE00002160660
chr1:
38465104-38464929
176
FHL3_HUMAN
1-52
52
1
A:1-30 (gaps)
37
1.3a
ENST00000373016
3a
ENSE00001319279
chr1:
38464820-38464646
175
FHL3_HUMAN
53-111
59
1
A:31-76
46
1.4
ENST00000373016
4
ENSE00001302258
chr1:
38463804-38463635
170
FHL3_HUMAN
111-167
57
1
A:77-82 (gaps)
17
1.5
ENST00000373016
5
ENSE00001296101
chr1:
38463542-38463356
187
FHL3_HUMAN
168-230
63
0
-
-
1.6c
ENST00000373016
6c
ENSE00001833847
chr1:
38463231-38462442
790
FHL3_HUMAN
230-280
51
0
-
-
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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