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2EEH
Asym. Unit
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Asym.Unit (476 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF FIRST PDZ DOMAIN OF PDZ DOMAIN CONTAINING PROTEIN 7
Authors
:
T. N. Niraula, N. Tochio, T. Tomizawa, K. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
15 Feb 07 (Deposition) - 21 Aug 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Pdz Domain, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Metal Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. N. Niraula, N. Tochio, T. Tomizawa, K. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of First Pdz Domain Of Pdz Domain Containing Protein 7
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
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1: PDZ (A:13-83|-)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
PDZD7_HUMAN
86-156
210-279
1
A:13-83
-
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Exons
(4, 4)
Info
All Exons
Exon 1.2a (A:1-7 (gaps))
Exon 1.3a (A:8-50)
Exon 1.3d (A:50-94)
Exon 1.4a (A:95-100 (gaps))
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1: Boundary 1.1a/1.2a
2: Boundary 1.2a/1.3a
3: Boundary 1.3a/1.3d
4: Boundary 1.3d/1.4a
5: Boundary 1.4a/1.4c
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000370215
1a
ENSE00001831789
chr10:
102790890-102790830
61
PDZD7_HUMAN
-
0
0
-
-
1.2a
ENST00000370215
2a
ENSE00002192868
chr10:
102790141-102789751
391
PDZD7_HUMAN
1-76
76
1
A:1-7 (gaps)
8
1.3a
ENST00000370215
3a
ENSE00001660607
chr10:
102783825-102783685
141
PDZD7_HUMAN
76-123
48
1
A:8-50
43
1.3d
ENST00000370215
3d
ENSE00001779253
chr10:
102783367-102783193
175
PDZD7_HUMAN
123-181
59
1
A:50-94
45
1.4a
ENST00000370215
4a
ENSE00001618361
chr10:
102782142-102781966
177
PDZD7_HUMAN
181-240
60
1
A:95-100 (gaps)
8
1.4c
ENST00000370215
4c
ENSE00001785651
chr10:
102781702-102781555
148
PDZD7_HUMAN
240-289
50
0
-
-
1.5
ENST00000370215
5
ENSE00001764896
chr10:
102780435-102780375
61
PDZD7_HUMAN
290-310
21
0
-
-
1.6a
ENST00000370215
6a
ENSE00001776871
chr10:
102778974-102778579
396
PDZD7_HUMAN
310-442
133
0
-
-
1.7
ENST00000370215
7
ENSE00001646289
chr10:
102778053-102777856
198
PDZD7_HUMAN
442-508
67
0
-
-
1.8
ENST00000370215
8
ENSE00001452084
chr10:
102777372-102777089
284
PDZD7_HUMAN
508-517
10
0
-
-
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d2eeha_ (A:)
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
Family
:
automated matches
(94)
Protein domain
:
automated matches
(94)
Human (Homo sapiens) [TaxId: 9606]
(71)
1a
d2eeha_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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