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2EA2
Asym. Unit
Info
Asym.Unit (70 KB)
Biol.Unit 1 (65 KB)
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(1)
Title
:
H-METAP2 COMPLEXED WITH A773812
Authors
:
C. H. Park
Date
:
30 Jan 07 (Deposition) - 05 Feb 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Protein-Ligand Complex, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. T. Wang, R. A. Mantei, M. Kawai, J. S. Tedrow, D. M. Barnes, J. Wang, Q. Zhang, P. Lou, L. A. Garcia, J. Bouska, M. Yates, C. Park, R. A. Judge, R. Lesniewski, G. S. Sheppard, R. L. Bell
Lead Optimization Of Methionine Aminopeptidase-2 (Metap2) Inhibitors Containing Sulfonamides Of 5, 6-Disubstituted Anthranilic Acids
Bioorg. Med. Chem. Lett. V. 17 2817 2007
(for further references see the
PDB file header
)
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: 3-ETHYL-6-{[(4-FLUOROPHENYL)SULFON... (F77a)
2a: MANGANESE (II) ION (MNa)
2b: MANGANESE (II) ION (MNb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
F77
1
Ligand/Ion
3-ETHYL-6-{[(4-FLUOROPHENYL)SULFONYL]AMINO}-2-METHYLBENZOIC ACID
2
MN
2
Ligand/Ion
MANGANESE (II) ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:251 , ASP A:262 , GLU A:459 , MN A:481 , HOH A:613
BINDING SITE FOR RESIDUE MN A 480
2
AC2
SOFTWARE
ASP A:262 , HIS A:331 , GLU A:364 , GLU A:459 , MN A:480 , F77 A:482
BINDING SITE FOR RESIDUE MN A 481
3
AC3
SOFTWARE
ALA A:230 , HIS A:231 , ASP A:262 , LEU A:328 , ASN A:329 , HIS A:331 , ILE A:338 , HIS A:339 , GLU A:364 , PHE A:366 , ALA A:414 , TYR A:444 , LEU A:447 , MN A:481
BINDING SITE FOR RESIDUE F77 A 482
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: MAP_2 (A:246-262)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MAP_2
PS01202
Methionine aminopeptidase subfamily 2 signature.
MAP2_HUMAN
246-262
1
A:246-262
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Exons
(8, 8)
Info
All Exons
Exon 1.4 (A:110-143)
Exon 1.5 (A:143-197)
Exon 1.6 (A:197-258)
Exon 1.7 (A:258-289)
Exon 1.8 (A:290-322)
Exon 1.9 (A:322-356)
Exon 1.10 (A:357-395)
Exon 1.11 (A:395-478)
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All Exon Boundaries
1: Boundary 1.3/1.4
2: Boundary 1.4/1.5
3: Boundary 1.5/1.6
4: Boundary 1.6/1.7
5: Boundary 1.7/1.8
6: Boundary 1.8/1.9
7: Boundary 1.9/1.10
8: Boundary 1.10/1.11
9: Boundary 1.11/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000323666
1
ENSE00001323969
chr12:
95867822-95868106
285
MAP2_HUMAN
1-51
51
0
-
-
1.2a
ENST00000323666
2a
ENSE00000753403
chr12:
95869847-95869954
108
MAP2_HUMAN
51-87
37
0
-
-
1.3
ENST00000323666
3
ENSE00000753404
chr12:
95876991-95877056
66
MAP2_HUMAN
87-109
23
0
-
-
1.4
ENST00000323666
4
ENSE00000753405
chr12:
95879655-95879757
103
MAP2_HUMAN
109-143
35
1
A:110-143
34
1.5
ENST00000323666
5
ENSE00000753406
chr12:
95887832-95887993
162
MAP2_HUMAN
143-197
55
1
A:143-197
55
1.6
ENST00000323666
6
ENSE00000753407
chr12:
95888733-95888914
182
MAP2_HUMAN
197-258
62
1
A:197-258
62
1.7
ENST00000323666
7
ENSE00000753408
chr12:
95889780-95889874
95
MAP2_HUMAN
258-289
32
1
A:258-289
32
1.8
ENST00000323666
8
ENSE00000922696
chr12:
95897841-95897937
97
MAP2_HUMAN
290-322
33
1
A:290-322
33
1.9
ENST00000323666
9
ENSE00000922697
chr12:
95905671-95905774
104
MAP2_HUMAN
322-356
35
1
A:322-356
35
1.10
ENST00000323666
10
ENSE00000922698
chr12:
95906577-95906692
116
MAP2_HUMAN
357-395
39
1
A:357-395
39
1.11
ENST00000323666
11
ENSE00001295819
chr12:
95907428-95909615
2188
MAP2_HUMAN
395-478
84
1
A:395-478
84
[
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d2ea2a1 (A:375-448)
2a: SCOP_d2ea2a2 (A:110-374,A:449-478)
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Protein Domains
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)
(
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Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
Methionine aminopeptidase, insert domain
(23)
Protein domain
:
Methionine aminopeptidase, insert domain
(23)
Human (Homo sapiens) [TaxId: 9606]
(18)
1a
d2ea2a1
A:375-448
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Creatinase/aminopeptidase
(103)
Superfamily
:
Creatinase/aminopeptidase
(103)
Family
:
Creatinase/aminopeptidase
(99)
Protein domain
:
Methionine aminopeptidase
(66)
Human (Homo sapiens) [TaxId: 9606]
(18)
2a
d2ea2a2
A:110-374,A:449-478
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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