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2D9Y
Asym. Unit
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Asym.Unit (602 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE PH DOMAIN OF PEPP-3 FROM HUMAN
Authors
:
H. Li, N. Tochio, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
13 Dec 05 (Deposition) - 13 Jun 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Ph Domain, Pepp-3, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Li, N. Tochio, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Ph Domain Of Pepp-3 From Human
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PH_DOMAIN (A:10-109)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PH_DOMAIN
PS50003
PH domain profile.
PKHA6_HUMAN
59-158
1
A:10-109
[
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Exons
(4, 4)
Info
All Exons
Exon 1.4 (A:1-20 (gaps))
Exon 1.5 (A:21-45)
Exon 1.6 (A:45-78)
Exon 1.8c (A:79-117)
View:
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All Exon Boundaries
1: Boundary 1.3a/1.4
2: Boundary 1.4/1.5
3: Boundary 1.5/1.6
4: Boundary 1.6/1.8c
5: Boundary 1.8c/1.9
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000272203
1
ENSE00001379233
chr1:
204329044-204328822
223
PKHA6_HUMAN
-
0
0
-
-
1.2
ENST00000272203
2
ENSE00001365727
chr1:
204243937-204243857
81
PKHA6_HUMAN
-
0
0
-
-
1.3a
ENST00000272203
3a
ENSE00001125876
chr1:
204242868-204242754
115
PKHA6_HUMAN
1-34
34
0
-
-
1.4
ENST00000272203
4
ENSE00000962329
chr1:
204237440-204237336
105
PKHA6_HUMAN
35-69
35
1
A:1-20 (gaps)
24
1.5
ENST00000272203
5
ENSE00000962330
chr1:
204236675-204236603
73
PKHA6_HUMAN
70-94
25
1
A:21-45
25
1.6
ENST00000272203
6
ENSE00000962331
chr1:
204234170-204234070
101
PKHA6_HUMAN
94-127
34
1
A:45-78
34
1.8c
ENST00000272203
8c
ENSE00000962332
chr1:
204230576-204230434
143
PKHA6_HUMAN
128-175
48
1
A:79-117
39
1.9
ENST00000272203
9
ENSE00000962333
chr1:
204228868-204228386
483
PKHA6_HUMAN
175-336
162
0
-
-
1.10a
ENST00000272203
10a
ENSE00000962334
chr1:
204226997-204226481
517
PKHA6_HUMAN
336-508
173
0
-
-
1.14
ENST00000272203
14
ENSE00000962335
chr1:
204219742-204219674
69
PKHA6_HUMAN
509-531
23
0
-
-
1.15b
ENST00000272203
15b
ENSE00000962336
chr1:
204218392-204218312
81
PKHA6_HUMAN
532-558
27
0
-
-
1.16
ENST00000272203
16
ENSE00000962337
chr1:
204218098-204217949
150
PKHA6_HUMAN
559-608
50
0
-
-
1.17
ENST00000272203
17
ENSE00000962338
chr1:
204216588-204216493
96
PKHA6_HUMAN
609-640
32
0
-
-
1.18
ENST00000272203
18
ENSE00000962339
chr1:
204214854-204214743
112
PKHA6_HUMAN
641-678
38
0
-
-
1.19
ENST00000272203
19
ENSE00000962340
chr1:
204214131-204213992
140
PKHA6_HUMAN
678-724
47
0
-
-
1.20
ENST00000272203
20
ENSE00000962341
chr1:
204210942-204210813
130
PKHA6_HUMAN
725-768
44
0
-
-
1.21
ENST00000272203
21
ENSE00000962342
chr1:
204210609-204210503
107
PKHA6_HUMAN
768-803
36
0
-
-
1.22
ENST00000272203
22
ENSE00001039740
chr1:
204199714-204199541
174
PKHA6_HUMAN
804-861
58
0
-
-
1.23
ENST00000272203
23
ENSE00001039735
chr1:
204198232-204198065
168
PKHA6_HUMAN
862-917
56
0
-
-
1.24
ENST00000272203
24
ENSE00001039739
chr1:
204197989-204197856
134
PKHA6_HUMAN
918-962
45
0
-
-
1.25
ENST00000272203
25
ENSE00001039741
chr1:
204197356-204197211
146
PKHA6_HUMAN
962-1011
50
0
-
-
1.26b
ENST00000272203
26b
ENSE00001125867
chr1:
204192713-204192590
124
PKHA6_HUMAN
1011-1048
38
0
-
-
1.27
ENST00000272203
27
ENSE00001801942
chr1:
204191907-204190349
1559
PKHA6_HUMAN
-
0
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2d9ya_ (A:)
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Protein Domains
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)
(
)
Organisms
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)
(
)
Class
:
All beta proteins
(24004)
Fold
:
PH domain-like barrel
(258)
Superfamily
:
PH domain-like
(257)
Family
:
automated matches
(50)
Protein domain
:
automated matches
(50)
Human (Homo sapiens) [TaxId: 9606]
(30)
1a
d2d9ya_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2d9yA00 (A:1-117)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
PH-domain like
(150)
Homologous Superfamily
:
Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)
(147)
Human (Homo sapiens)
(85)
1a
2d9yA00
A:1-117
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Pfam Domains
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Chain A
Asymmetric Unit 1
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