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2D89
Asym. Unit
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Asym.Unit (619 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE CH DOMAIN FROM HUMAN EH DOMAIN BINDING PROTEIN 1
Authors
:
T. Tomizawa, T. Kigawa, S. Koshiba, M. Inoue, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
02 Dec 05 (Deposition) - 02 Jun 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
All Alpha, Calponin Homology Domain, Actin Binding, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Protein, Protein Binding
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Tomizawa, T. Kigawa, S. Koshiba, M. Inoue, S. Yokoyama
Solution Structure Of The Ch Domain From Human Eh Domain Binding Protein 1
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: CH (A:9-110)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CH
PS50021
Calponin homology domain profile.
EHBP1_HUMAN
443-545
1
A:9-110
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Exons
(4, 4)
Info
All Exons
Exon 1.15 (A:1-8)
Exon 1.17 (A:9-55)
Exon 1.18 (A:55-71)
Exon 1.19b (A:72-119 (gaps))
View:
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All Exon Boundaries
1: Boundary 1.13b/1.15
2: Boundary 1.15/1.17
3: Boundary 1.17/1.18
4: Boundary 1.18/1.19b
5: Boundary 1.19b/1.20a
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3b
ENST00000263991
3b
ENSE00001270580
chr2:
62933001-62933187
187
EHBP1_HUMAN
-
0
0
-
-
1.5b
ENST00000263991
5b
ENSE00002142414
chr2:
62934032-62934430
399
EHBP1_HUMAN
1-35
35
0
-
-
1.6
ENST00000263991
6
ENSE00001651185
chr2:
62974530-62974587
58
EHBP1_HUMAN
35-54
20
0
-
-
1.7b
ENST00000263991
7b
ENSE00001610459
chr2:
62991401-62991496
96
EHBP1_HUMAN
55-86
32
0
-
-
1.8a
ENST00000263991
8a
ENSE00001746644
chr2:
62998474-62998527
54
EHBP1_HUMAN
87-104
18
0
-
-
1.9c
ENST00000263991
9c
ENSE00001639652
chr2:
63053222-63053403
182
EHBP1_HUMAN
105-165
61
0
-
-
1.10
ENST00000263991
10
ENSE00000962865
chr2:
63058154-63058293
140
EHBP1_HUMAN
165-212
48
0
-
-
1.11b
ENST00000263991
11b
ENSE00001270570
chr2:
63085541-63085645
105
EHBP1_HUMAN
212-247
36
0
-
-
1.12
ENST00000263991
12
ENSE00000443426
chr2:
63086304-63086426
123
EHBP1_HUMAN
247-288
42
0
-
-
1.13b
ENST00000263991
13b
ENSE00001476087
chr2:
63091866-63092106
241
EHBP1_HUMAN
288-368
81
0
-
-
1.15
ENST00000263991
15
ENSE00001270708
chr2:
63101481-63101667
187
EHBP1_HUMAN
368-430
63
1
A:1-8
8
1.17
ENST00000263991
17
ENSE00001270698
chr2:
63169853-63170031
179
EHBP1_HUMAN
431-490
60
1
A:9-55
47
1.18
ENST00000263991
18
ENSE00000810128
chr2:
63170937-63170985
49
EHBP1_HUMAN
490-506
17
1
A:55-71
17
1.19b
ENST00000263991
19b
ENSE00001270679
chr2:
63175395-63176297
903
EHBP1_HUMAN
507-807
301
1
A:72-119 (gaps)
159
1.20a
ENST00000263991
20a
ENSE00000810130
chr2:
63182652-63182795
144
EHBP1_HUMAN
808-855
48
0
-
-
1.22b
ENST00000263991
22b
ENSE00000810131
chr2:
63206323-63206470
148
EHBP1_HUMAN
856-905
50
0
-
-
1.23b
ENST00000263991
23b
ENSE00001270654
chr2:
63215066-63215173
108
EHBP1_HUMAN
905-941
37
0
-
-
1.24
ENST00000263991
24
ENSE00001270645
chr2:
63217851-63217975
125
EHBP1_HUMAN
941-982
42
0
-
-
1.25
ENST00000263991
25
ENSE00000810134
chr2:
63220665-63220803
139
EHBP1_HUMAN
983-1029
47
0
-
-
1.26b
ENST00000263991
26b
ENSE00001155573
chr2:
63221006-63221112
107
EHBP1_HUMAN
1029-1064
36
0
-
-
1.27
ENST00000263991
27
ENSE00000810136
chr2:
63223778-63223901
124
EHBP1_HUMAN
1065-1106
42
0
-
-
1.28
ENST00000263991
28
ENSE00001270612
chr2:
63264670-63264769
100
EHBP1_HUMAN
1106-1139
34
0
-
-
1.29
ENST00000263991
29
ENSE00001270602
chr2:
63265878-63265951
74
EHBP1_HUMAN
1139-1164
26
0
-
-
1.30b
ENST00000263991
30b
ENSE00000757989
chr2:
63272201-63272315
115
EHBP1_HUMAN
1164-1202
39
0
-
-
1.31f
ENST00000263991
31f
ENSE00001547495
chr2:
63272545-63273622
1078
EHBP1_HUMAN
1202-1231
30
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2d89a_ (A:)
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Protein Domains
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Organisms
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
CH domain-like
(55)
Superfamily
:
Calponin-homology domain, CH-domain
(53)
Family
:
automated matches
(25)
Protein domain
:
automated matches
(25)
Human (Homo sapiens) [TaxId: 9606]
(23)
1a
d2d89a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2d89A01 (A:3-114)
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Organisms
(
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(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Actin-binding Protein, T-fimbrin; domain 1
(51)
Homologous Superfamily
:
Actin-binding Protein, T-fimbrin; domain 1
(51)
Human (Homo sapiens)
(39)
1a
2d89A01
A:3-114
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Pfam Domains
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Chain A
Asymmetric Unit 1
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