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2C5C
Asym. Unit
Info
Asym.Unit (141 KB)
Biol.Unit 1 (69 KB)
Biol.Unit 2 (66 KB)
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(1)
Title
:
SHIGA-LIKE TOXIN 1 B SUBUNIT COMPLEXED WITH A BIVALENT INHIBITOR
Authors
:
R. B. Dodd, R. J. Read
Date
:
26 Oct 05 (Deposition) - 27 Nov 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.94
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Keywords
:
Bacterial Exotoxin, Gb3 Binding Activity, Bivalent Ligand, Protein-Carbohydrate Recognition, Ob Fold, Toxin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. B. Dodd, R. J. Read
Extensive Cross-Linking Of The Shiga-Like Toxin 1 B Subunit By A Bivalent Ligand
To Be Published
[
close entry info
]
Hetero Components
(6, 64)
Info
All Hetero Components
1a: BETA-D-GLUCOSE (BGCa)
1b: BETA-D-GLUCOSE (BGCb)
1c: BETA-D-GLUCOSE (BGCc)
1d: BETA-D-GLUCOSE (BGCd)
2a: BETA-D-GALACTOSE (GALa)
2b: BETA-D-GALACTOSE (GALb)
2c: BETA-D-GALACTOSE (GALc)
2d: BETA-D-GALACTOSE (GALd)
2e: BETA-D-GALACTOSE (GALe)
2f: BETA-D-GALACTOSE (GALf)
2g: BETA-D-GALACTOSE (GALg)
2h: BETA-D-GALACTOSE (GALh)
2i: BETA-D-GALACTOSE (GALi)
2j: BETA-D-GALACTOSE (GALj)
2k: BETA-D-GALACTOSE (GALk)
2l: BETA-D-GALACTOSE (GALl)
3a: ALPHA D-GALACTOSE (GLAa)
3aa: ALPHA D-GALACTOSE (GLAaa)
3ab: ALPHA D-GALACTOSE (GLAab)
3ac: ALPHA D-GALACTOSE (GLAac)
3b: ALPHA D-GALACTOSE (GLAb)
3c: ALPHA D-GALACTOSE (GLAc)
3d: ALPHA D-GALACTOSE (GLAd)
3e: ALPHA D-GALACTOSE (GLAe)
3f: ALPHA D-GALACTOSE (GLAf)
3g: ALPHA D-GALACTOSE (GLAg)
3h: ALPHA D-GALACTOSE (GLAh)
3i: ALPHA D-GALACTOSE (GLAi)
3j: ALPHA D-GALACTOSE (GLAj)
3k: ALPHA D-GALACTOSE (GLAk)
3l: ALPHA D-GALACTOSE (GLAl)
3m: ALPHA D-GALACTOSE (GLAm)
3n: ALPHA D-GALACTOSE (GLAn)
3o: ALPHA D-GALACTOSE (GLAo)
3p: ALPHA D-GALACTOSE (GLAp)
3q: ALPHA D-GALACTOSE (GLAq)
3r: ALPHA D-GALACTOSE (GLAr)
3s: ALPHA D-GALACTOSE (GLAs)
3t: ALPHA D-GALACTOSE (GLAt)
3u: ALPHA D-GALACTOSE (GLAu)
3v: ALPHA D-GALACTOSE (GLAv)
3w: ALPHA D-GALACTOSE (GLAw)
3x: ALPHA D-GALACTOSE (GLAx)
3y: ALPHA D-GALACTOSE (GLAy)
3z: ALPHA D-GALACTOSE (GLAz)
4a: ALPHA-D-GLUCOSE (GLCa)
4b: ALPHA-D-GLUCOSE (GLCb)
4c: ALPHA-D-GLUCOSE (GLCc)
4d: ALPHA-D-GLUCOSE (GLCd)
4e: ALPHA-D-GLUCOSE (GLCe)
4f: ALPHA-D-GLUCOSE (GLCf)
4g: ALPHA-D-GLUCOSE (GLCg)
4h: ALPHA-D-GLUCOSE (GLCh)
4i: ALPHA-D-GLUCOSE (GLCi)
4j: ALPHA-D-GLUCOSE (GLCj)
5a: DIETHYL PROPANE-1,3-DIYLBISCARBAMA... (S10a)
5b: DIETHYL PROPANE-1,3-DIYLBISCARBAMA... (S10b)
5c: DIETHYL PROPANE-1,3-DIYLBISCARBAMA... (S10c)
5d: DIETHYL PROPANE-1,3-DIYLBISCARBAMA... (S10d)
5e: DIETHYL PROPANE-1,3-DIYLBISCARBAMA... (S10e)
5f: DIETHYL PROPANE-1,3-DIYLBISCARBAMA... (S10f)
5g: DIETHYL PROPANE-1,3-DIYLBISCARBAMA... (S10g)
5h: DIETHYL PROPANE-1,3-DIYLBISCARBAMA... (S10h)
6a: SULFATE ION (SO4a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BGC
4
Ligand/Ion
BETA-D-GLUCOSE
2
GAL
12
Ligand/Ion
BETA-D-GALACTOSE
3
GLA
29
Ligand/Ion
ALPHA D-GALACTOSE
4
GLC
10
Ligand/Ion
ALPHA-D-GLUCOSE
5
S10
8
Ligand/Ion
DIETHYL PROPANE-1,3-DIYLBISCARBAMATE
6
SO4
1
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(64, 64)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:32 , ARG A:33 , TRP A:34 , ASN A:35 , GAL A:1071 , ASP B:18 , ASP F:16 , ARG J:33 , GLA J:1073
BINDING SITE FOR RESIDUE GLA A1070
02
AC2
SOFTWARE
TRP A:34 , GLA A:1070 , GLC A:1072 , S10 A:1076 , ASP F:16 , GAL J:1074 , GLC J:1075
BINDING SITE FOR RESIDUE GAL A1071
03
AC3
SOFTWARE
GAL A:1071 , S10 A:1076 , ASP F:16 , THR J:1 , GLU J:65
BINDING SITE FOR RESIDUE GLC A1072
04
AC4
SOFTWARE
PHE A:30 , THR A:31 , ASN A:32 , ARG A:33 , GLY A:62 , PHE A:63 , GAL A:1074 , ASP B:16 , ASN J:32 , GLA J:1070 , GAL J:1071
BINDING SITE FOR RESIDUE GLA A1073
05
AC5
SOFTWARE
THR A:1 , THR A:54 , ASN A:55 , GLY A:62 , GLA A:1073 , GLC A:1075 , GAL J:1071 , S10 J:1076
BINDING SITE FOR RESIDUE GAL A1074
06
AC6
SOFTWARE
ASN A:55 , GAL A:1074 , GLA I:1070 , ASP J:18 , TRP J:34 , GAL J:1071 , S10 J:1076
BINDING SITE FOR RESIDUE GLC A1075
07
AC7
SOFTWARE
ASN B:32 , ARG B:33 , TRP B:34 , ASN B:35 , GAL B:71 , TYR C:14 , ASP C:18 , TRP C:34
BINDING SITE FOR RESIDUE GLA B 70
08
AC8
SOFTWARE
S10 A:1076 , TRP B:34 , GLA B:70 , GLC B:72 , ASP F:17
BINDING SITE FOR RESIDUE GAL B 71
09
AC9
SOFTWARE
S10 A:1076 , GAL B:71 , ASN F:15 , ASP F:17 , THR F:19 , PHE F:30
BINDING SITE FOR RESIDUE GLC B 72
10
BC1
SOFTWARE
THR B:31 , ASN B:32 , ARG B:33 , GLY B:62 , PHE B:63 , GAL B:1073 , ASP C:16
BINDING SITE FOR RESIDUE GLA B1072
11
BC2
SOFTWARE
THR B:54 , ASN B:55 , GLY B:62 , GLA B:1072 , GLC B:1074
BINDING SITE FOR RESIDUE GAL B1073
12
BC3
SOFTWARE
ASN B:55 , GAL B:1073
BINDING SITE FOR RESIDUE GLC B1074
13
BC4
SOFTWARE
ASN B:15 , ASP B:17 , THR B:19 , PHE B:30 , GAL B:1077 , S10 F:1073
BINDING SITE FOR RESIDUE GLC B1075
14
BC5
SOFTWARE
GAL B:1077 , ARG F:33 , TRP F:34 , ASN F:35 , TYR G:14 , ASP G:18
BINDING SITE FOR RESIDUE GLA B1076
15
BC6
SOFTWARE
ASP B:17 , GLC B:1075 , GLA B:1076 , TRP F:34 , S10 F:1073
BINDING SITE FOR RESIDUE GAL B1077
16
BC7
SOFTWARE
ASN C:32 , ARG C:33 , TRP C:34 , ASN C:35
BINDING SITE FOR RESIDUE GLA C1070
17
BC8
SOFTWARE
THR C:31 , ASN C:32 , ARG C:33 , PHE C:63 , SER C:64 , GLA C:1072 , ASP D:16
BINDING SITE FOR RESIDUE GLA C1071
18
BC9
SOFTWARE
THR C:54 , ASN C:55 , GLY C:62 , GLA C:1071 , S10 C:1073
BINDING SITE FOR RESIDUE GLA C1072
19
CC1
SOFTWARE
GAL C:1075 , PHE F:30 , THR F:31 , ASN F:32 , ARG F:33 , GLY F:62 , PHE F:63 , SER F:64 , ASP G:16
BINDING SITE FOR RESIDUE GLA C1074
20
CC2
SOFTWARE
S10 C:1073 , GLA C:1074 , GLC C:1076 , THR F:1 , THR F:54 , ASN F:55
BINDING SITE FOR RESIDUE GAL C1075
21
CC3
SOFTWARE
S10 C:1073 , GAL C:1075 , ASN F:55
BINDING SITE FOR RESIDUE GLC C1076
22
CC4
SOFTWARE
ASN D:32 , ARG D:33 , TRP D:34 , ASN D:35 , GLA D:1071 , ASP E:18
BINDING SITE FOR RESIDUE GLA D1070
23
CC5
SOFTWARE
TRP D:34 , GLA D:1070
BINDING SITE FOR RESIDUE GLA D1071
24
CC6
SOFTWARE
THR D:31 , ASN D:32 , ARG D:33 , GLY D:62 , PHE D:63 , SER D:64 , GAL D:1073 , GLA D:1076 , GAL D:1077 , ASP E:16
BINDING SITE FOR RESIDUE GLA D1072
25
CC7
SOFTWARE
THR D:54 , ASN D:55 , GLY D:62 , GLA D:1072 , BGC D:1074 , S10 D:1075 , GLA D:1076 , GAL D:1077 , BGC D:1078
BINDING SITE FOR RESIDUE GAL D1073
26
CC8
SOFTWARE
GAL D:1073 , S10 D:1075 , GAL D:1077 , BGC D:1078
BINDING SITE FOR RESIDUE BGC D1074
27
CC9
SOFTWARE
THR D:31 , ASN D:32 , ARG D:33 , GLY D:62 , PHE D:63 , SER D:64 , GLA D:1072 , GAL D:1073 , GAL D:1077 , ASP E:16
BINDING SITE FOR RESIDUE GLA D1076
28
DC1
SOFTWARE
THR D:54 , ASN D:55 , GLY D:62 , GLA D:1072 , GAL D:1073 , BGC D:1074 , S10 D:1075 , GLA D:1076 , BGC D:1078
BINDING SITE FOR RESIDUE GAL D1077
29
DC2
SOFTWARE
GAL D:1073 , BGC D:1074 , S10 D:1075 , GAL D:1077
BINDING SITE FOR RESIDUE BGC D1078
30
DC3
SOFTWARE
ASP A:18 , ASN E:32 , ARG E:33 , TRP E:34 , ASN E:35 , GLA E:1071 , GLC J:1075
BINDING SITE FOR RESIDUE GLA E1070
31
DC4
SOFTWARE
S10 A:1076 , TRP E:34 , GLA E:1070
BINDING SITE FOR RESIDUE GLA E1071
32
DC5
SOFTWARE
ASP A:16 , THR E:31 , ASN E:32 , ARG E:33 , GLY E:62 , PHE E:63 , GAL E:1073
BINDING SITE FOR RESIDUE GLA E1072
33
DC6
SOFTWARE
THR E:54 , ASN E:55 , GLY E:62 , GLA E:1072 , GLC E:1074 , S10 E:1075
BINDING SITE FOR RESIDUE GAL E1073
34
DC7
SOFTWARE
ASN E:55 , GAL E:1073 , THR I:46 , HOH I:2001 , ILE J:45
BINDING SITE FOR RESIDUE GLC E1074
35
DC8
SOFTWARE
ASN G:32 , ARG G:33 , TRP G:34 , ASN G:35 , GLA G:1071 , TYR H:14 , ASP H:18 , TRP H:34
BINDING SITE FOR RESIDUE GLA G1070
36
DC9
SOFTWARE
GLA G:1070
BINDING SITE FOR RESIDUE GLA G1071
37
EC1
SOFTWARE
ASN H:32 , ARG H:33 , TRP H:34 , ASN H:35 , GLA H:1071
BINDING SITE FOR RESIDUE GLA H1070
38
EC2
SOFTWARE
TRP H:34 , GLA H:1070
BINDING SITE FOR RESIDUE GLA H1071
39
EC3
SOFTWARE
ASN H:32 , ARG H:33 , PHE H:63 , SER H:64 , GAL H:1073 , ASP I:16
BINDING SITE FOR RESIDUE GLA H1072
40
EC4
SOFTWARE
THR H:54 , ASN H:55 , GLY H:62 , GLA H:1072 , GLC H:1074
BINDING SITE FOR RESIDUE GAL H1073
41
EC5
SOFTWARE
GAL H:1073
BINDING SITE FOR RESIDUE GLC H1074
42
EC6
SOFTWARE
GLC A:1075 , ASN I:32 , ARG I:33 , TRP I:34 , ASN I:35 , GLA I:1071 , ASP J:18 , TRP J:34
BINDING SITE FOR RESIDUE GLA I1070
43
EC7
SOFTWARE
TRP I:34 , GLA I:1070
BINDING SITE FOR RESIDUE GLA I1071
44
EC8
SOFTWARE
PHE I:30 , THR I:31 , ASN I:32 , ARG I:33 , GLY I:62 , PHE I:63 , GLA I:1073 , GLA I:1077 , GLA I:1078 , ASP J:16
BINDING SITE FOR RESIDUE GLA I1072
45
EC9
SOFTWARE
THR I:54 , ASN I:55 , GLY I:62 , GLA I:1072 , BGC I:1074 , S10 I:1075 , GLA I:1077 , GLA I:1078 , BGC I:1079
BINDING SITE FOR RESIDUE GLA I1073
46
FC1
SOFTWARE
ASN I:55 , GLA I:1073 , S10 I:1075 , GLA I:1078 , BGC I:1079
BINDING SITE FOR RESIDUE BGC I1074
47
FC2
SOFTWARE
PHE I:30 , THR I:31 , ASN I:32 , ARG I:33 , GLY I:62 , PHE I:63 , GLA I:1072 , GLA I:1073 , GLA I:1078 , ASP J:16
BINDING SITE FOR RESIDUE GLA I1077
48
FC3
SOFTWARE
THR I:54 , ASN I:55 , GLY I:62 , GLA I:1072 , GLA I:1073 , BGC I:1074 , S10 I:1075 , GLA I:1077 , BGC I:1079
BINDING SITE FOR RESIDUE GLA I1078
49
FC4
SOFTWARE
ASN I:55 , GLA I:1073 , BGC I:1074 , S10 I:1075 , GLA I:1078
BINDING SITE FOR RESIDUE BGC I1079
50
FC5
SOFTWARE
ARG A:33 , GLA A:1073 , ASP B:16 , ASP F:18 , TRP F:34 , ARG J:33 , TRP J:34 , ASN J:35 , GAL J:1071
BINDING SITE FOR RESIDUE GLA J1070
51
FC6
SOFTWARE
GLA A:1073 , GAL A:1074 , GLC A:1075 , ASP B:16 , TRP J:34 , GLA J:1070 , GLC J:1072 , S10 J:1077
BINDING SITE FOR RESIDUE GAL J1071
52
FC7
SOFTWARE
THR A:1 , GLU A:65 , ASP B:16 , HOH B:2001 , GAL J:1071 , S10 J:1077
BINDING SITE FOR RESIDUE GLC J1072
53
FC8
SOFTWARE
ASN A:32 , GLA A:1070 , ASP F:16 , THR J:31 , ASN J:32 , ARG J:33 , GLY J:62 , PHE J:63 , SER J:64 , GAL J:1074 , S10 J:1076 , HOH J:2003
BINDING SITE FOR RESIDUE GLA J1073
54
FC9
SOFTWARE
GAL A:1071 , THR J:54 , ASN J:55 , GLY J:62 , GLA J:1073 , GLC J:1075 , S10 J:1076
BINDING SITE FOR RESIDUE GAL J1074
55
GC1
SOFTWARE
ASP A:18 , GAL A:1071 , GLA E:1070 , ASN J:55 , GAL J:1074 , S10 J:1076
BINDING SITE FOR RESIDUE GLC J1075
56
GC2
SOFTWARE
HIS I:58 , S10 I:1075
BINDING SITE FOR RESIDUE SO4 I1076
57
GC3
SOFTWARE
GAL A:1071 , GLC A:1072 , GAL B:71 , GLC B:72 , GLA E:1071
BINDING SITE FOR RESIDUE S10 A1076
58
GC4
SOFTWARE
ASN C:32 , GLA C:1072 , GAL C:1075 , GLC C:1076
BINDING SITE FOR RESIDUE S10 C1073
59
GC5
SOFTWARE
GLY D:60 , GAL D:1073 , BGC D:1074 , GAL D:1077 , BGC D:1078
BINDING SITE FOR RESIDUE S10 D1075
60
GC6
SOFTWARE
GAL E:1073 , ILE F:45
BINDING SITE FOR RESIDUE S10 E1075
61
GC7
SOFTWARE
GLC B:1075 , GAL B:1077
BINDING SITE FOR RESIDUE S10 F1073
62
GC8
SOFTWARE
GLA I:1073 , BGC I:1074 , SO4 I:1076 , GLA I:1078 , BGC I:1079
BINDING SITE FOR RESIDUE S10 I1075
63
GC9
SOFTWARE
ASN A:32 , GAL A:1074 , GLC A:1075 , ASP J:17 , THR J:19 , ASN J:32 , GLA J:1073 , GAL J:1074 , GLC J:1075
BINDING SITE FOR RESIDUE S10 J1076
64
HC1
SOFTWARE
GAL J:1071 , GLC J:1072
BINDING SITE FOR RESIDUE S10 J1077
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d2c5ca_ (A:)
1b: SCOP_d2c5cb_ (B:)
1c: SCOP_d2c5cc_ (C:)
1d: SCOP_d2c5cd_ (D:)
1e: SCOP_d2c5ce_ (E:)
1f: SCOP_d2c5cf_ (F:)
1g: SCOP_d2c5cg_ (G:)
1h: SCOP_d2c5ch_ (H:)
1i: SCOP_d2c5ci_ (I:)
1j: SCOP_d2c5cj_ (J:)
View:
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Folds
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Superfamilies
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(
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Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
OB-fold
(1179)
Superfamily
:
Bacterial enterotoxins
(188)
Family
:
Bacterial AB5 toxins, B-subunits
(85)
Protein domain
:
Verotoxin-1/shiga-toxin, B-pentamer
(19)
Escherichia coli [TaxId: 562]
(14)
1a
d2c5ca_
A:
1b
d2c5cb_
B:
1c
d2c5cc_
C:
1d
d2c5cd_
D:
1e
d2c5ce_
E:
1f
d2c5cf_
F:
1g
d2c5cg_
G:
1h
d2c5ch_
H:
1i
d2c5ci_
I:
1j
d2c5cj_
J:
[
close SCOP info
]
CATH Domains
(1, 10)
Info
all CATH domains
1a: CATH_2c5cA00 (A:1-69)
1b: CATH_2c5cB00 (B:1-69)
1c: CATH_2c5cC00 (C:1-69)
1d: CATH_2c5cD00 (D:1-69)
1e: CATH_2c5cE00 (E:1-69)
1f: CATH_2c5cF00 (F:1-69)
1g: CATH_2c5cG00 (G:1-69)
1h: CATH_2c5cH00 (H:1-69)
1i: CATH_2c5cI00 (I:1-69)
1j: CATH_2c5cJ00 (J:1-69)
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Topologies
(
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(
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.70, no name defined]
(18)
Bacteriophage h30. Organism_taxid: 12371.
(1)
1a
2c5cA00
A:1-69
1b
2c5cB00
B:1-69
1c
2c5cC00
C:1-69
1d
2c5cD00
D:1-69
1e
2c5cE00
E:1-69
1f
2c5cF00
F:1-69
1g
2c5cG00
G:1-69
1h
2c5cH00
H:1-69
1i
2c5cI00
I:1-69
1j
2c5cJ00
J:1-69
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Asymmetric Unit 1
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
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In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
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