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2C35
Biol. Unit 3
Info
Asym.Unit (193 KB)
Biol.Unit 1 (50 KB)
Biol.Unit 2 (49 KB)
Biol.Unit 3 (50 KB)
Biol.Unit 4 (50 KB)
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(1)
Title
:
SUBUNITS RPB4 AND RPB7 OF HUMAN RNA POLYMERASE II
Authors
:
H. Meka, F. Werner, S. C. Cordell, S. Onesti, P. Brick
Date
:
04 Oct 05 (Deposition) - 18 Nov 05 (Release) - 27 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Transcription, Rna Polymerase Ii, Polymerase, Nucleotidyltransferase
(Keyword Search:
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Reference
:
H. Meka, F. Werner, S. C. Cordell, S. Onesti, P. Brick
Crystal Structure And Rna Binding Of The Rpb4/Rpb7 Subunits Of Human Rna Polymerase Ii.
Nucleic Acids Res. V. 33 6435 2005
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Hetero Components
(0, 0)
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Sites
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(3, 12)
Info
All SCOP Domains
1a: SCOP_d2c35a1 (A:14-142)
1b: SCOP_d2c35c_ (C:)
1c: SCOP_d2c35e_ (E:)
1d: SCOP_d2c35g_ (G:)
2a: SCOP_d2c35b1 (B:78-171)
2b: SCOP_d2c35d1 (D:78-171)
2c: SCOP_d2c35f1 (F:78-171)
2d: SCOP_d2c35h1 (H:78-171)
3a: SCOP_d2c35b2 (B:1-77)
3b: SCOP_d2c35d2 (D:1-77)
3c: SCOP_d2c35f2 (F:1-77)
3d: SCOP_d2c35h2 (H:1-77)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
SAM domain-like
(639)
Superfamily
:
HRDC-like
(16)
Family
:
RNA polymerase II subunit RBP4 (RpoF)
(3)
Protein domain
:
RNA polymerase II subunit RBP4 (RpoF)
(3)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d2c35a1
A:14-142
1b
d2c35c_
C:
1c
d2c35e_
E:
1d
d2c35g_
G:
Class
:
All beta proteins
(24004)
Fold
:
OB-fold
(1179)
Superfamily
:
Nucleic acid-binding proteins
(590)
Family
:
Cold shock DNA-binding domain-like
(310)
Protein domain
:
C-terminal domain of RNA polymerase II subunit RBP7 (RpoE)
(8)
Human (Homo sapiens) [TaxId: 9606]
(1)
2a
d2c35b1
B:78-171
2b
d2c35d1
D:78-171
2c
d2c35f1
F:78-171
2d
d2c35h1
H:78-171
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Dodecin subunit-like
(56)
Superfamily
:
N-terminal, heterodimerisation domain of RBP7 (RpoE)
(8)
Family
:
N-terminal, heterodimerisation domain of RBP7 (RpoE)
(8)
Protein domain
:
N-terminal, heterodimerisation domain of RBP7 (RpoE)
(8)
Human (Homo sapiens) [TaxId: 9606]
(1)
3a
d2c35b2
B:1-77
3b
d2c35d2
D:1-77
3c
d2c35f2
F:1-77
3d
d2c35h2
H:1-77
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CATH Domains
(2, 8)
Info
all CATH domains
1a: CATH_2c35B01 (B:1-80)
1b: CATH_2c35D01 (D:1-80)
1c: CATH_2c35F01 (F:1-80)
1d: CATH_2c35H01 (H:1-80)
2a: CATH_2c35B02 (B:81-171)
2b: CATH_2c35D02 (D:81-171)
2c: CATH_2c35F02 (F:81-171)
2d: CATH_2c35H02 (H:81-171)
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Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Dna Ligase; domain 1
(375)
Homologous Superfamily
:
DNA-directed RNA polymerase ii subunit; domain 1
(30)
Human (Homo sapiens)
(1)
1a
2c35B01
B:1-80
1b
2c35D01
D:1-80
1c
2c35F01
F:1-80
1d
2c35H01
H:1-80
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
Nucleic acid-binding proteins
(483)
Human (Homo sapiens)
(27)
2a
2c35B02
B:81-171
2b
2c35D02
D:81-171
2c
2c35F02
F:81-171
2d
2c35H02
H:81-171
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Pfam Domains
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Asym.Unit (193 KB)
Header - Asym.Unit
Biol.Unit 1 (50 KB)
Header - Biol.Unit 1
Biol.Unit 2 (49 KB)
Header - Biol.Unit 2
Biol.Unit 3 (50 KB)
Header - Biol.Unit 3
Biol.Unit 4 (50 KB)
Header - Biol.Unit 4
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