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2C17
Theor. Model
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Theoretical Model (127 KB)
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(1)
Title
:
COMPUTATIONAL MODEL OF HUMAN P450C17
Authors
:
R. J. Auchus, W. L. Miller
Date
:
02 Jun 99 (Deposition) - 19 Jul 99 (Release) - 01 Apr 03 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A,_
#
(
#
: chains that contain no standard or modified protein/DNA/RNA residue)
Keywords
:
17-Alpha-Hydroxylase, 17/20-Lyase, P450C17, Sex Steroid Biosynthesis, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. J. Auchus, W. L. Miller
Molecular Modeling Of Human P450C17 (17Alpha-Hydroxylase/17, 20-Lyase): Insights Into Reaction Mechanisms And Effects Of Mutations.
Mol. Endocrinol. V. 13 1169 1999
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 1)
Info
All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
[
close Hetero Component info
]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(25, 25)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_001271 (Y17S, chain A, )
02: VAR_013147 (F46C, chain A, )
03: VAR_073043 (R49Q, chain A, )
04: VAR_022746 (R49W, chain A, )
05: VAR_001272 (S59P, chain A, )
06: VAR_022747 (F67V, chain A, )
07: VAR_022748 (D69V, chain A, )
08: VAR_073044 (W74R, chain A, )
09: VAR_073045 (A127E, chain A, )
10: VAR_022749 (N130D, chain A, )
11: VAR_022750 (Y282D, chain A, )
12: VAR_001274 (P295T, chain A, )
13: VAR_022752 (R300C, chain A, )
14: VAR_001275 (R300H, chain A, )
15: VAR_001276 (R311Q, chain A, )
16: VAR_022753 (R315C, chain A, )
17: VAR_001277 (H326L, chain A, )
18: VAR_073046 (H326N, chain A, )
19: VAR_073047 (W359L, chain A, )
20: VAR_022754 (W359R, chain A, )
21: VAR_022755 (F370C, chain A, )
22: VAR_022756 (P381L, chain A, )
23: VAR_001278 (R393H, chain A, )
24: VAR_001280 (R449C, chain A, )
25: VAR_022757 (R449H, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_001271
Y
64
S
CP17A_HUMAN
Disease (AH5)
---
A
Y
17
S
02
UniProt
VAR_013147
F
93
C
CP17A_HUMAN
Disease (AH5)
---
A
F
46
C
03
UniProt
VAR_073043
R
96
Q
CP17A_HUMAN
Disease (AH5)
---
A
R
49
Q
04
UniProt
VAR_022746
R
96
W
CP17A_HUMAN
Disease (AH5)
---
A
R
49
W
05
UniProt
VAR_001272
S
106
P
CP17A_HUMAN
Disease (AH5)
---
A
S
59
P
06
UniProt
VAR_022747
F
114
V
CP17A_HUMAN
Disease (AH5)
---
A
F
67
V
07
UniProt
VAR_022748
D
116
V
CP17A_HUMAN
Disease (AH5)
---
A
D
69
V
08
UniProt
VAR_073044
W
121
R
CP17A_HUMAN
Disease (AH5)
---
A
W
74
R
09
UniProt
VAR_073045
A
174
E
CP17A_HUMAN
Disease (AH5)
---
A
A
127
E
10
UniProt
VAR_022749
N
177
D
CP17A_HUMAN
Disease (AH5)
---
A
N
130
D
11
UniProt
VAR_022750
Y
329
D
CP17A_HUMAN
Disease (AH5)
104894144
A
Y
282
D
12
UniProt
VAR_001274
P
342
T
CP17A_HUMAN
Disease (AH5)
---
A
P
295
T
13
UniProt
VAR_022752
R
347
C
CP17A_HUMAN
Disease (AH5)
---
A
R
300
C
14
UniProt
VAR_001275
R
347
H
CP17A_HUMAN
Disease (AH5)
---
A
R
300
H
15
UniProt
VAR_001276
R
358
Q
CP17A_HUMAN
Disease (AH5)
---
A
R
311
Q
16
UniProt
VAR_022753
R
362
C
CP17A_HUMAN
Disease (AH5)
---
A
R
315
C
17
UniProt
VAR_001277
H
373
L
CP17A_HUMAN
Disease (AH5)
---
A
H
326
L
18
UniProt
VAR_073046
H
373
N
CP17A_HUMAN
Disease (AH5)
---
A
H
326
N
19
UniProt
VAR_073047
W
406
L
CP17A_HUMAN
Disease (AH5)
---
A
W
359
L
20
UniProt
VAR_022754
W
406
R
CP17A_HUMAN
Disease (AH5)
---
A
W
359
R
21
UniProt
VAR_022755
F
417
C
CP17A_HUMAN
Disease (AH5)
---
A
F
370
C
22
UniProt
VAR_022756
P
428
L
CP17A_HUMAN
Disease (AH5)
---
A
P
381
L
23
UniProt
VAR_001278
R
440
H
CP17A_HUMAN
Disease (AH5)
---
A
R
393
H
24
UniProt
VAR_001280
R
496
C
CP17A_HUMAN
Disease (AH5)
---
A
R
449
C
25
UniProt
VAR_022757
R
496
H
CP17A_HUMAN
Disease (AH5)
---
A
R
449
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: CYTOCHROME_P450 (A:388-397)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CYTOCHROME_P450
PS00086
Cytochrome P450 cysteine heme-iron ligand signature.
CP17A_HUMAN
435-444
1
A:388-397
[
close PROSITE info
]
Exons
(8, 8)
Info
All Exons
Exon 1.1a (A:1-52)
Exon 1.2b (A:53-99)
Exon 1.3a (A:99-175)
Exon 1.3d (A:176-204)
Exon 1.4a (A:205-276)
Exon 1.5 (A:277-333)
Exon 1.6b (A:333-368)
Exon 1.7c (A:368-454)
View:
Select:
Label:
All Exon Boundaries
1: Boundary -/1.1a
2: Boundary 1.1a/1.2b
3: Boundary 1.2b/1.3a
4: Boundary 1.3a/1.3d
5: Boundary 1.3d/1.4a
6: Boundary 1.4a/1.5
7: Boundary 1.5/1.6b
8: Boundary 1.6b/1.7c
9: Boundary 1.7c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000369887
1a
ENSE00001451182
chr10:
104597290-104596822
469
CP17A_HUMAN
1-99
99
1
A:1-52
52
1.2b
ENST00000369887
2b
ENSE00000987437
chr10:
104595149-104595011
139
CP17A_HUMAN
100-146
47
1
A:53-99
47
1.3a
ENST00000369887
3a
ENSE00000987438
chr10:
104594771-104594542
230
CP17A_HUMAN
146-222
77
1
A:99-175
77
1.3d
ENST00000369887
3d
ENSE00000987439
chr10:
104593879-104593793
87
CP17A_HUMAN
223-251
29
1
A:176-204
29
1.4a
ENST00000369887
4a
ENSE00000987440
chr10:
104592965-104592750
216
CP17A_HUMAN
252-323
72
1
A:205-276
72
1.5
ENST00000369887
5
ENSE00000987441
chr10:
104592437-104592268
170
CP17A_HUMAN
324-380
57
1
A:277-333
57
1.6b
ENST00000369887
6b
ENSE00000987442
chr10:
104591368-104591265
104
CP17A_HUMAN
380-415
36
1
A:333-368
36
1.7c
ENST00000369887
7c
ENSE00001451179
chr10:
104590742-104590288
455
CP17A_HUMAN
415-508
94
1
A:368-454
87
[
close EXON info
]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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]
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Chain A
Asymmetric Unit 1
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