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2BXR
Asym. Unit
Info
Asym.Unit (150 KB)
Biol.Unit 1 (73 KB)
Biol.Unit 2 (73 KB)
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(1)
Title
:
HUMAN MONOAMINE OXIDASE A IN COMPLEX WITH CLORGYLINE, CRYSTAL FORM A
Authors
:
L. De Colibus, C. Binda, D. E. Edmondson, A. Mattevi
Date
:
27 Jul 05 (Deposition) - 09 Aug 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Neurotransmitter, Membrane-Protein, Flavin, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. De Colibus, M. Li, C. Binda, A. Lustig, D. E. Edmondson, A. Mattevi
Three-Dimensional Structure Of Human Monoamine Oxidase A (Mao A): Relation To The Structures Of Rat Mao A And Human Mao B
Proc. Natl. Acad. Sci. Usa V. 102 12864 2005
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
2a: N-[3-(2,4-DICHLOROPHENOXY)PROPYL]-... (MLGa)
2b: N-[3-(2,4-DICHLOROPHENOXY)PROPYL]-... (MLGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FAD
2
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
MLG
2
Ligand/Ion
N-[3-(2,4-DICHLOROPHENOXY)PROPYL]-N-METHYL-N-PROP-2-YNYLAMINE
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:19 , GLY A:20 , GLY A:22 , ILE A:23 , SER A:24 , LEU A:42 , GLU A:43 , ALA A:44 , ARG A:45 , GLY A:49 , GLY A:50 , ARG A:51 , THR A:52 , GLY A:66 , GLY A:67 , ALA A:68 , TYR A:69 , PRO A:243 , VAL A:244 , ALA A:272 , ILE A:273 , LEU A:277 , TRP A:397 , TYR A:402 , CYS A:406 , TYR A:407 , GLY A:434 , THR A:435 , GLY A:443 , TYR A:444 , MET A:445 , ALA A:448 , MLG A:601
BINDING SITE FOR RESIDUE FAD A 600
2
AC2
SOFTWARE
GLU A:216 , LEU A:337 , PHE A:352 , TYR A:407 , FAD A:600
BINDING SITE FOR RESIDUE MLG A 601
3
AC3
SOFTWARE
ILE B:19 , GLY B:20 , GLY B:22 , ILE B:23 , SER B:24 , LEU B:42 , GLU B:43 , ALA B:44 , ARG B:45 , GLY B:49 , GLY B:50 , ARG B:51 , THR B:52 , GLY B:66 , GLY B:67 , ALA B:68 , TYR B:69 , PRO B:243 , VAL B:244 , ALA B:272 , ILE B:273 , LEU B:277 , TRP B:397 , TYR B:402 , CYS B:406 , TYR B:407 , GLY B:434 , THR B:435 , GLY B:443 , TYR B:444 , MET B:445 , ALA B:448 , MLG B:601
BINDING SITE FOR RESIDUE FAD B 600
4
AC4
SOFTWARE
GLU B:216 , ILE B:335 , LEU B:337 , PHE B:352 , TYR B:407 , FAD B:600
BINDING SITE FOR RESIDUE MLG B 601
[
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SAPs(SNPs)/Variants
(5, 10)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_036545 (D15E, chain A/B, )
2: VAR_AOFA_HUMAN_CCDS14260_1_01 (D15E, chain A/B, )
3: VAR_064573 (E188K, chain A/B, )
4: VAR_071963 (C266F, chain A/B, )
5: VAR_014795 (F314V, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_036545
D
15
E
AOFA_HUMAN
Unclassified
---
A/B
D
15
E
2
CancerSNP
VAR_AOFA_HUMAN_CCDS14260_1_01
*
D
15
E
AOFA_HUMAN
Disease (Breast cancer)
---
A/B
D
15
E
3
UniProt
VAR_064573
E
188
K
AOFA_HUMAN
Polymorphism
77698881
A/B
E
188
K
4
UniProt
VAR_071963
C
266
F
AOFA_HUMAN
Disease
---
A/B
C
266
F
5
UniProt
VAR_014795
F
314
V
AOFA_HUMAN
Polymorphism
1799835
A/B
F
314
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
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]
Exons
(14, 28)
Info
All Exons
Exon 1.1a (A:12-25 | B:12-25)
Exon 1.3 (A:25-56 | B:25-56)
Exon 1.4 (A:57-102 | B:57-102)
Exon 1.5 (A:103-137 (gaps) | B:103-137 (gaps...)
Exon 1.6 (A:138-168 | B:138-168)
Exon 1.7 (A:168-215 (gaps) | B:168-215 (gaps...)
Exon 1.8b (A:216-265 | B:216-265)
Exon 1.9 (A:266-319 | B:266-319)
Exon 1.10 (A:319-351 | B:319-351)
Exon 1.11 (A:351-369 | B:351-369)
Exon 1.12 (A:369-388 | B:369-388)
Exon 1.13 (A:389-421 | B:389-421)
Exon 1.14b (A:421-458 | B:421-458)
Exon 1.15 (A:459-464 | B:459-464)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.1a
02: Boundary 1.1a/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5
05: Boundary 1.5/1.6
06: Boundary 1.6/1.7
07: Boundary 1.7/1.8b
08: Boundary 1.8b/1.9
09: Boundary 1.9/1.10
10: Boundary 1.10/1.11
11: Boundary 1.11/1.12
12: Boundary 1.12/1.13
13: Boundary 1.13/1.14b
14: Boundary 1.14b/1.15
15: Boundary 1.15/1.16b
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000338702
1a
ENSE00001415055
X:43515467-43515662
196
AOFA_HUMAN
1-25
25
2
A:12-25
B:12-25
14
14
1.3
ENST00000338702
3
ENSE00001416375
X:43542761-43542855
95
AOFA_HUMAN
25-56
32
2
A:25-56
B:25-56
32
32
1.4
ENST00000338702
4
ENSE00001409729
X:43552538-43552675
138
AOFA_HUMAN
57-102
46
2
A:57-102
B:57-102
46
46
1.5
ENST00000338702
5
ENSE00001405769
X:43571119-43571223
105
AOFA_HUMAN
103-137
35
2
A:103-137 (gaps)
B:103-137 (gaps)
35
35
1.6
ENST00000338702
6
ENSE00001403714
X:43571952-43572043
92
AOFA_HUMAN
138-168
31
2
A:138-168
B:138-168
31
31
1.7
ENST00000338702
7
ENSE00001400730
X:43587420-43587561
142
AOFA_HUMAN
168-215
48
2
A:168-215 (gaps)
B:168-215 (gaps)
48
48
1.8b
ENST00000338702
8b
ENSE00001383783
X:43590488-43590637
150
AOFA_HUMAN
216-265
50
2
A:216-265
B:216-265
50
50
1.9
ENST00000338702
9
ENSE00001382812
X:43590941-43591100
160
AOFA_HUMAN
266-319
54
2
A:266-319
B:266-319
54
54
1.10
ENST00000338702
10
ENSE00001377890
X:43591946-43592042
97
AOFA_HUMAN
319-351
33
2
A:319-351
B:319-351
33
33
1.11
ENST00000338702
11
ENSE00001373498
X:43595474-43595527
54
AOFA_HUMAN
351-369
19
2
A:351-369
B:351-369
19
19
1.12
ENST00000338702
12
ENSE00001369566
X:43599928-43599985
58
AOFA_HUMAN
369-388
20
2
A:369-388
B:369-388
20
20
1.13
ENST00000338702
13
ENSE00001677475
X:43601197-43601294
98
AOFA_HUMAN
389-421
33
2
A:389-421
B:389-421
33
33
1.14b
ENST00000338702
14b
ENSE00001614970
X:43603041-43603152
112
AOFA_HUMAN
421-458
38
2
A:421-458
B:421-458
38
38
1.15
ENST00000338702
15
ENSE00001378166
X:43603356-43603418
63
AOFA_HUMAN
459-479
21
2
A:459-464
B:459-464
6
6
1.16b
ENST00000338702
16b
ENSE00001389556
X:43603614-43606068
2455
AOFA_HUMAN
480-527
48
0
-
-
[
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SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Sorry, no Info available
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_2bxrA01 (A:12-50,A:72-87,A:220-300,A:409-464)
1b: CATH_2bxrB01 (B:12-50,B:72-87,B:220-300,B:409-464)
2a: CATH_2bxrA02 (A:51-71,A:88-116,A:209-219,A:301-408)
2b: CATH_2bxrB02 (B:51-71,B:88-116,B:209-219,B:301-408)
3a: CATH_2bxrA03 (A:117-208)
3b: CATH_2bxrB03 (B:117-208)
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(bba) Sandwich
(528)
Topology
:
FAD/NAD(P)-binding domain
(373)
Homologous Superfamily
:
[code=3.50.50.60, no name defined]
(373)
Human (Homo sapiens)
(57)
1a
2bxrA01
A:12-50,A:72-87,A:220-300,A:409-464
1b
2bxrB01
B:12-50,B:72-87,B:220-300,B:409-464
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Polyamine Oxidase; Chain A, domain 2
(62)
Homologous Superfamily
:
[code=3.90.660.10, no name defined]
(61)
Human (Homo sapiens)
(29)
2a
2bxrA02
A:51-71,A:88-116,A:209-219,A:301-408
2b
2bxrB02
B:51-71,B:88-116,B:209-219,B:301-408
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Guanine Nucleotide Dissociation Inhibitor; domain 1
(50)
Homologous Superfamily
:
Guanine Nucleotide Dissociation Inhibitor, domain 1
(50)
Human (Homo sapiens)
(29)
3a
2bxrA03
A:117-208
3b
2bxrB03
B:117-208
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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