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2BVW
Asym. Unit
Info
Asym.Unit (137 KB)
Biol.Unit 1 (131 KB)
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(1)
Title
:
CELLOBIOHYDROLASE II (CEL6A) FROM HUMICOLA INSOLENS IN COMPLEX WITH GLUCOSE AND CELLOTETRAOSE
Authors
:
A. Varrot, G. J. Davies, M. Schulein
Date
:
18 Feb 99 (Deposition) - 25 Feb 00 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Hydrolase, Cellulose Degradation, Cellobiohydrolase, Cellulase, Glycoside Hydrolase Family 6
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Varrot, M. Schulein, G. J. Davies
Structural Changes Of The Active Site Tunnel Of Humicola Insolens Cellobiohydrolase, Cel6A, Upon Oligosaccharide Binding.
Biochemistry V. 38 8884 1999
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Hetero Components
(5, 13)
Info
All Hetero Components
1a: BETA-D-GLUCOSE (BGCa)
1b: BETA-D-GLUCOSE (BGCb)
2a: CELLOTRIOSE (CTRa)
3a: BETA-D-GLUCOPYRANOSYL-(1->4)-BETA-... (CTTa)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
4g: GLYCEROL (GOLg)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BGC
2
Ligand/Ion
BETA-D-GLUCOSE
2
CTR
1
Ligand/Ion
CELLOTRIOSE
3
CTT
1
Ligand/Ion
BETA-D-GLUCOPYRANOSYL-(1->4)-BETA-D-GLUCOPYRANOSYL-(1->4)-BETA-D-GLUCOPYRANOSYL-(1->4)-BETA-D-GLUCOPYRANOSE
4
GOL
7
Ligand/Ion
GLYCEROL
5
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:141 , ASP A:145 , ASN A:199 , HOH A:657 , HOH A:675 , HOH A:695 , HOH A:893
BINDING SITE FOR RESIDUE NAG A 500
02
AC2
SOFTWARE
TRP A:137 , ASP A:139 , SER A:186 , LYS A:399 , PRO A:400 , GLU A:403 , GLY A:432 , HOH A:619 , HOH A:630 , HOH A:684 , HOH A:690
BINDING SITE FOR RESIDUE BGC A 602
03
AC3
SOFTWARE
ASP A:180 , ASP A:226 , THR A:233 , ASN A:234 , HIS A:271 , GLY A:273 , TRP A:274 , TRP A:277 , ALA A:279 , ASN A:280 , ASN A:310 , TRP A:371 , HOH A:636 , HOH A:646 , HOH A:655 , HOH A:659 , HOH A:696 , HOH A:703 , HOH A:707 , HOH A:782 , HOH A:803
BINDING SITE FOR RESIDUE CTT A 600
04
AC4
SOFTWARE
VAL A:316 , SER A:317 , SER A:318 , PRO A:320 , HOH A:857 , HOH A:924
BINDING SITE FOR RESIDUE GOL A 604
05
AC5
SOFTWARE
TRP A:100 , ALA A:101 , ARG A:106 , HOH A:649 , HOH A:715 , HIS B:110 , ILE B:114
BINDING SITE FOR RESIDUE GOL A 605
06
AC6
SOFTWARE
HIS A:110 , HOH A:629 , HOH A:709 , ALA B:101 , ARG B:106 , GLU B:131 , HOH B:747
BINDING SITE FOR RESIDUE GOL A 606
07
AC7
SOFTWARE
GLY A:91 , ASN A:92 , PRO A:93 , ARG A:218 , ASN B:159 , GLN B:160 , GLY B:162 , HOH B:781
BINDING SITE FOR RESIDUE GOL A 609
08
AC8
SOFTWARE
TYR A:415 , ASP A:416 , TYR A:417
BINDING SITE FOR RESIDUE GOL A 610
09
AC9
SOFTWARE
ASP B:119 , PRO B:120 , ASN B:141 , ASP B:145 , ASN B:199 , HOH B:684 , HOH B:700 , HOH B:733 , HOH B:857
BINDING SITE FOR RESIDUE NAG B 500
10
BC1
SOFTWARE
TRP B:137 , ASP B:139 , SER B:186 , LYS B:399 , PRO B:400 , GLU B:403 , ALA B:431 , GLY B:432 , HOH B:631 , HOH B:647 , HOH B:661 , HOH B:663
BINDING SITE FOR RESIDUE BGC B 603
11
BC2
SOFTWARE
ASP B:180 , ASP B:226 , THR B:233 , ASN B:234 , HIS B:271 , GLY B:273 , TRP B:274 , ASN B:280 , ASN B:310 , GLY B:369 , TRP B:371 , HOH B:610 , HOH B:626 , HOH B:649 , HOH B:667 , HOH B:685 , HOH B:689 , HOH B:868
BINDING SITE FOR RESIDUE CTR B 601
12
BC3
SOFTWARE
ARG B:206 , SER B:213 , HOH B:855
BINDING SITE FOR RESIDUE GOL B 608
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: GLYCOSYL_HYDROL_F6_1 (A:172-188,B:172-188)
2: GLYCOSYL_HYDROL_F6_2 (A:220-229,B:220-229)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLYCOSYL_HYDROL_F6_1
PS00655
Glycosyl hydrolases family 6 signature 1.
GUX6_HUMIN
198-214
2
A:172-188
B:172-188
2
GLYCOSYL_HYDROL_F6_2
PS00656
Glycosyl hydrolases family 6 signature 2.
GUX6_HUMIN
246-255
2
A:220-229
B:220-229
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2bvwa_ (A:)
1b: SCOP_d2bvwb_ (B:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
7-stranded beta/alpha barrel
(137)
Superfamily
:
Glycosyl hydrolases family 6, cellulases
(42)
Family
:
Glycosyl hydrolases family 6, cellulases
(34)
Protein domain
:
Cellobiohydrolase II (Cel6)
(17)
Humicola insolens, Cel6a [TaxId: 34413]
(9)
1a
d2bvwa_
A:
1b
d2bvwb_
B:
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2bvwB00 (B:91-450)
1b: CATH_2bvwA00 (A:90-450)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
7-stranded glycosidases (cellulases)
(28)
Humicola insolens. Organism_taxid: 34413.
(9)
1a
2bvwB00
B:91-450
1b
2bvwA00
A:90-450
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Pfam Domains
(0, 0)
Info
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Sorry, no Info available
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Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
set fontsize 20
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Asym.Unit (137 KB)
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