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2BBY
Asym. Unit
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Asym.Unit (597 KB)
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Models
(30 )
Title
:
DNA-BINDING DOMAIN FROM HUMAN RAP30, NMR, 30 STRUCTURES
Authors
:
C. M. Groft, S. N. Uljon, R. Wang, M. H. Werner
Date
:
27 Apr 98 (Deposition) - 25 Nov 98 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (30 x)
Keywords
:
Transcription Regulation, Rap30, Nmr, Dna-Binding Domain
(Keyword Search:
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Reference
:
C. M. Groft, S. N. Uljon, R. Wang, M. H. Werner
Structural Homology Between The Rap30 Dna-Binding Domain And Linker Histone H5: Implications For Preinitiation Complex Assembly.
Proc. Natl. Acad. Sci. Usa V. 95 9117 1998
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(2, 2)
Info
All Exons
Exon 1.9c (A:175-210)
Exon 1.10 (A:211-243)
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1: Boundary 1.8/1.9c
2: Boundary 1.9c/1.10
3: Boundary 1.10/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000340473
1
ENSE00001479865
chr13:
45694650-45694856
207
T2FB_HUMAN
1-22
22
0
-
-
1.2
ENST00000340473
2
ENSE00001389810
chr13:
45710868-45710941
74
T2FB_HUMAN
23-47
25
0
-
-
1.3
ENST00000340473
3
ENSE00001629288
chr13:
45723905-45723923
19
T2FB_HUMAN
47-53
7
0
-
-
1.4
ENST00000340473
4
ENSE00001370421
chr13:
45725822-45725966
145
T2FB_HUMAN
54-102
49
0
-
-
1.5b
ENST00000340473
5b
ENSE00001364027
chr13:
45781559-45781640
82
T2FB_HUMAN
102-129
28
0
-
-
1.8
ENST00000340473
8
ENSE00001369464
chr13:
45827006-45827105
100
T2FB_HUMAN
129-162
34
0
-
-
1.9c
ENST00000340473
9c
ENSE00001377067
chr13:
45841368-45841511
144
T2FB_HUMAN
163-210
48
1
A:175-210
36
1.10
ENST00000340473
10
ENSE00001400657
chr13:
45857577-45858237
661
T2FB_HUMAN
211-249
39
1
A:211-243
33
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SCOP Domains
(1, 1)
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1a: SCOP_d2bbya_ (A:)
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(
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
DNA-binding domain from rap30
(2)
Protein domain
:
DNA-binding domain from rap30
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d2bbya_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_2bbyA00 (A:175-243)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
'winged helix' repressor DNA binding domain
(507)
Human (Homo sapiens)
(70)
1a
2bbyA00
A:175-243
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Pfam Domains
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Chain A
Asymmetric Unit 1
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