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Asym. Unit
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Asym.Unit (62 KB)
Biol.Unit 1 (57 KB)
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(1)
Title
:
THE STRUCTURE OF A PUTATIVE MANNOSEPHOSPHATE ISOMERASE FROM ARCHAEOGLOBUS FULGIDUS
Authors
:
M. E. Cuff, T. Skarina, A. Edwards, A. Savchenko, A. Joachimiak, Midwes For Structural Genomics (Mcsg)
Date
:
06 Jun 05 (Deposition) - 19 Jul 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Mannose 6-Phosphate, Isomerase, Archaeoglobus Fulgidus, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. E. Cuff, T. Skarina, A. Edwards, A. Savchenko, A. Joachimiak
The Structure Of A Putative Mannosephosphate Isomerase From Archaeoglobus Fulgidus
To Be Published
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Hetero Components
(5, 14)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
1c: ACETIC ACID (ACYc)
1d: ACETIC ACID (ACYd)
1e: ACETIC ACID (ACYe)
1f: ACETIC ACID (ACYf)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
3a: GLYCEROL (GOLa)
4a: BETA-L-FRUCTO-FURANOSE (LFRa)
5a: SELENOMETHIONINE (MSEa)
5b: SELENOMETHIONINE (MSEb)
5c: SELENOMETHIONINE (MSEc)
5d: SELENOMETHIONINE (MSEd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACY
6
Ligand/Ion
ACETIC ACID
2
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
3
GOL
1
Ligand/Ion
GLYCEROL
4
LFR
1
Ligand/Ion
BETA-L-FRUCTO-FURANOSE
5
MSE
4
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:93 , PRO A:94 , THR A:95 , GLN A:96 , ASP A:149 , ASP A:151 , PHE A:152 , LYS A:153
BINDING SITE FOR RESIDUE LFR A 600
02
AC2
SOFTWARE
TRP A:23 , PHE A:123 , TYR A:252 , ALA A:254 , ARG A:270 , HOH A:971
BINDING SITE FOR RESIDUE EDO A 800
03
AC3
SOFTWARE
SER A:102 , ASP A:103 , PRO A:171 , SER A:187 , HOH A:994
BINDING SITE FOR RESIDUE EDO A 801
04
AC4
SOFTWARE
GLY A:110 , GLU A:111 , ALA A:112 , TYR A:164 , LYS A:221 , VAL A:233 , ASP A:235 , LYS A:291 , HOH A:936
BINDING SITE FOR RESIDUE ACY A 502
05
AC5
SOFTWARE
GLN A:9 , GLU A:12 , LYS A:28 , TYR A:272 , HOH A:889 , HOH A:921
BINDING SITE FOR RESIDUE ACY A 503
06
AC6
SOFTWARE
ARG A:170 , PHE A:215 , GLU A:216 , LYS A:218
BINDING SITE FOR RESIDUE ACY A 504
07
AC7
SOFTWARE
PHE A:194 , ASN A:196 , ASP A:199 , GLU A:288 , ARG A:289 , HOH A:806
BINDING SITE FOR RESIDUE ACY A 505
08
AC8
SOFTWARE
THR A:95 , HIS A:98 , TRP A:120 , GLY A:177 , GLU A:184 , GOL A:700
BINDING SITE FOR RESIDUE ACY A 506
09
AC9
SOFTWARE
PHE A:30 , ARG A:31 , GLN A:32 , GLY A:256 , TYR A:257 , HIS A:269 , ARG A:270
BINDING SITE FOR RESIDUE ACY A 507
10
BC1
SOFTWARE
ARG A:87 , HIS A:98 , HIS A:100 , HIS A:175 , GLU A:184 , ACY A:506 , HOH A:907
BINDING SITE FOR RESIDUE GOL A 700
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1zx5a1 (A:1-299)
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Protein Domains
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(
)
Organisms
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)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Double-stranded beta-helix
(580)
Superfamily
:
RmlC-like cupins
(220)
Family
:
Type I phosphomannose isomerase
(3)
Protein domain
:
Putative mannosephosphate isomerase AF0035
(1)
Archaeoglobus fulgidus [TaxId: 2234]
(1)
1a
d1zx5a1
A:1-299
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1zx5A01 (A:0-216)
1b: CATH_1zx5A02 (A:217-299)
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)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
Jelly Rolls
(177)
Archaeoglobus fulgidus. Organism_taxid: 2234.
(1)
1a
1zx5A01
A:0-216
1b
1zx5A02
A:217-299
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_PMI_typeI_1zx5A01 (A:14-130)
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Clan
:
Cupin
(179)
Family
:
PMI_typeI
(4)
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
(1)
1a
PMI_typeI-1zx5A01
A:14-130
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Asymmetric Unit 1
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