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1YY7
Asym. Unit
Info
Asym.Unit (82 KB)
Biol.Unit 1 (78 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF STRINGENT STARVATION PROTEIN A (SSPA), AN RNA POLYMERASE-ASSOCIATED TRANSCRIPTION FACTOR
Authors
:
A. -M. Hansen, Y. Gu, M. Li, M. Andrykovitch, D. S. Waugh, D. J. Jin, X. Ji
Date
:
23 Feb 05 (Deposition) - 01 Mar 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.02
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Gst Fold, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. -M. Hansen, Y. Gu, M. Li, M. Andrykovitch, D. S. Waugh, D. J. Jin, X. Ji
Structural Basis For The Function Of Stringent Starvation Protein A As A Transcription Factor
J. Biol. Chem. V. 280 17380 2005
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: CITRIC ACID (CITa)
1b: CITRIC ACID (CITb)
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No.
Name
Count
Type
Full Name
1
CIT
2
Ligand/Ion
CITRIC ACID
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PRO B:169 , MET B:207 , HIS B:208 , LEU B:209 , ARG B:212 , HOH B:581 , HOH B:618 , HOH B:635 , HOH B:670 , HOH B:672 , HOH B:694
BINDING SITE FOR RESIDUE CIT B 501
2
AC2
SOFTWARE
TYR A:56 , THR A:58 , TYR A:70 , GLU A:71 , HOH A:233 , HIS B:104 , ARG B:105 , HIS B:108 , ASP B:109
BINDING SITE FOR RESIDUE CIT B 502
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1yy7a2 (A:88-209)
1b: SCOP_d1yy7b2 (B:88-213)
2a: SCOP_d1yy7a1 (A:4-87)
2b: SCOP_d1yy7b1 (B:10-87)
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Protein Domains
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Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
automated matches
(86)
Protein domain
:
automated matches
(86)
Yersinia pestis [TaxId: 632]
(3)
1a
d1yy7a2
A:88-209
1b
d1yy7b2
B:88-213
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
automated matches
(347)
Protein domain
:
automated matches
(347)
Yersinia pestis [TaxId: 632]
(3)
2a
d1yy7a1
A:4-87
2b
d1yy7b1
B:10-87
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CATH Domains
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_GST_C_1yy7B01 (B:102-194)
1b: PFAM_GST_C_1yy7B02 (B:102-194)
2a: PFAM_GST_N_3_1yy7B03 (B:13-87)
2b: PFAM_GST_N_3_1yy7B04 (B:13-87)
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)
Clan
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GST_C
(118)
Family
:
GST_C
(102)
Yersinia pestis
(1)
1a
GST_C-1yy7B01
B:102-194
1b
GST_C-1yy7B02
B:102-194
Clan
:
Thioredoxin
(367)
Family
:
GST_N_3
(20)
Yersinia pestis
(1)
2a
GST_N_3-1yy7B03
B:13-87
2b
GST_N_3-1yy7B04
B:13-87
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Asym.Unit (82 KB)
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