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1YWM
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(1)
Title
:
CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF GROUP B STREPTOCOCCUS ALPHA C PROTEIN
Authors
:
T. C. Auperin, G. R. Bolduc, M. J. Baron, A. Heroux, D. J. Filman, L. C. Mad J. M. Hogle
Date
:
18 Feb 05 (Deposition) - 08 Mar 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.86
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Beta Sandwich, Fibronectin Fold, Antiparallel Three-Helix Bundle, Surface Active Protein
(Keyword Search:
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Reference
:
T. C. Auperin, G. R. Bolduc, M. J. Baron, A. Heroux, D. J. Filman, L. C. Madoff, J. M. Hogle
Crystal Structure Of The N-Terminal Domain Of The Group B Streptococcus Alpha C Protein.
J. Biol. Chem. V. 280 18245 2005
(for further references see the
PDB file header
)
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Hetero Components
(2, 3)
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All Hetero Components
1a: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-D... (DTUa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
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No.
Name
Count
Type
Full Name
1
DTU
1
Ligand/Ion
(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
2
GOL
2
Ligand/Ion
GLYCEROL
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Sites
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:104 , GLY A:117 , GLY A:136 , GLU A:137 , GLY A:139 , HOH A:393 , HOH A:451 , HOH A:512
BINDING SITE FOR RESIDUE DTU A 1001
2
AC2
SOFTWARE
LYS A:144 , GLN A:148 , ILE A:149 , HOH A:426 , HOH A:428
BINDING SITE FOR RESIDUE GOL A 2001
3
AC3
SOFTWARE
SER A:153 , LYS A:167 , GLU A:220 , HOH A:328 , HOH A:414
BINDING SITE FOR RESIDUE GOL A 2002
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SAPs(SNPs)/Variants
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_AlphaC_N_1ywmA01 (A:57-225)
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Clan
:
no clan defined [family: AlphaC_N]
(2)
Family
:
AlphaC_N
(2)
Streptococcus agalactiae serotype Ia
(2)
1a
AlphaC_N-1ywmA01
A:57-225
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