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1YVK
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Asym.Unit (110 KB)
Biol.Unit 1 (104 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE BACILLIS SUBTILIS ACETYLTRANSFERASE IN COMPLEX WITH COA, NORTHEAST STRUCTURAL GENOMICS TARGET SR237.
Authors
:
F. Forouhar, W. Yong, R. Xiao, M. Ciano, T. B. Acton, G. T. Montelione, J. F. Hunt, L. Tong, Northeast Structural Genomics Consortium (Nesg)
Date
:
15 Feb 05 (Deposition) - 22 Feb 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.01
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Alphs-Beta Protein, Structural Genomics, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Forouhar, W. Yong, R. Xiao, M. Ciano, T. B. Acton, G. T. Montelione, J. F. Hunt, L. Tong
Crystal Structure Of The Bacillis Subtilis Acetyltransferase In Complex With Coa, Northeast Structural Genomics Target Sr237.
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: COENZYME A (COAa)
1b: COENZYME A (COAb)
1c: COENZYME A (COAc)
1d: COENZYME A (COAd)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
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No.
Name
Count
Type
Full Name
1
COA
4
Ligand/Ion
COENZYME A
2
MSE
4
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:25 , ILE A:69 , ALA A:70 , VAL A:71 , GLN A:76 , LYS A:77 , GLY A:79 , GLY A:81 , LYS A:82 , HIS A:110 , GLN A:111 , SER A:113 , LEU A:114 , TYR A:115 , LYS A:117 , COA B:202
BINDING SITE FOR RESIDUE COA A 201
2
AC2
SOFTWARE
LYS A:117 , COA A:201 , ALA B:25 , ILE B:69 , ALA B:70 , VAL B:71 , GLN B:76 , LYS B:77 , LYS B:78 , GLY B:79 , PHE B:80 , GLY B:81 , LYS B:82 , HIS B:110 , GLN B:111 , SER B:113 , LEU B:114 , LYS B:117
BINDING SITE FOR RESIDUE COA B 202
3
AC3
SOFTWARE
ALA C:25 , ILE C:69 , ALA C:70 , VAL C:71 , GLN C:76 , LYS C:77 , LYS C:78 , GLY C:79 , GLY C:81 , LYS C:82 , HIS C:110 , GLN C:111 , LEU C:114 , TYR C:115 , LYS C:117 , COA D:204
BINDING SITE FOR RESIDUE COA C 203
4
AC4
SOFTWARE
COA C:203 , ALA D:25 , ILE D:69 , ALA D:70 , VAL D:71 , GLN D:76 , LYS D:77 , GLY D:79 , PHE D:80 , GLY D:81 , LYS D:82 , HIS D:110 , GLN D:111 , LEU D:114 , LYS D:117
BINDING SITE FOR RESIDUE COA D 204
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: GNAT (A:6-155,B:6-155,C:6-155,D:6-155)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GNAT
PS51186
Gcn5-related N-acetyltransferase (GNAT) domain profile.
YVBK_BACSU
6-155
4
A:6-155
B:6-155
C:6-155
D:6-155
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1yvka1 (A:5-156)
1b: SCOP_d1yvkb_ (B:)
1c: SCOP_d1yvkc_ (C:)
1d: SCOP_d1yvkd_ (D:)
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Protein Domains
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Acyl-CoA N-acyltransferases (Nat)
(250)
Superfamily
:
Acyl-CoA N-acyltransferases (Nat)
(250)
Family
:
N-acetyl transferase, NAT
(154)
Protein domain
:
Hypothetical protein YvbK (BSu33890)
(1)
Bacillus subtilis [TaxId: 1423]
(1)
1a
d1yvka1
A:5-156
1b
d1yvkb_
B:
1c
d1yvkc_
C:
1d
d1yvkd_
D:
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CATH Domains
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Acetyltransf_1_1yvkD01 (D:44-121)
1b: PFAM_Acetyltransf_1_1yvkD02 (D:44-121)
1c: PFAM_Acetyltransf_1_1yvkD03 (D:44-121)
1d: PFAM_Acetyltransf_1_1yvkD04 (D:44-121)
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)
Clan
:
Acetyltrans
(109)
Family
:
Acetyltransf_1
(58)
Bacillus subtilis
(9)
1a
Acetyltransf_1-1yvkD01
D:44-121
1b
Acetyltransf_1-1yvkD02
D:44-121
1c
Acetyltransf_1-1yvkD03
D:44-121
1d
Acetyltransf_1-1yvkD04
D:44-121
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