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1YJ0
Asym. Unit
Info
Asym.Unit (58 KB)
Biol.Unit 1 (54 KB)
Biol.Unit 2 (157 KB)
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(1)
Title
:
CRYSTAL STRUCTURES OF CHICKEN ANNEXIN V IN COMPLEX WITH ZN2+
Authors
:
E. A. Ortlund, G. Chai, B. Genge, L. N. Y. Wu, R. E. Wuthier, L. Lebioda
Date
:
11 Jan 05 (Deposition) - 08 Mar 05 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.95
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (3x)
Keywords
:
Annexin; Membrane Binding; Matrix Vessicle, Protein And Metal Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
E. A. Ortlund, G. Chai, B. Genge, L. N. Y. Wu, R. E. Wuthier, L. Lebioda
Crystal Structures Of Chicken Annexin A5 In Complex With Functional Modifiers Ca2+ And Zn2+ Reveal Zn2+ Induced Formation Of Non-Planar Assemblies
Annexins V. 1 183 2005
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Hetero Components
(2, 10)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
1f: SULFATE ION (SO4f)
1g: SULFATE ION (SO4g)
1h: SULFATE ION (SO4h)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
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No.
Name
Count
Type
Full Name
1
SO4
8
Ligand/Ion
SULFATE ION
2
ZN
2
Ligand/Ion
ZINC ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:70 , VAL A:82 , ARG A:86 , HIS A:94 , ZN A:402
BINDING SITE FOR RESIDUE SO4 A 500
2
AC2
SOFTWARE
GLY A:75 , LYS A:76
BINDING SITE FOR RESIDUE SO4 A 501
3
AC3
SOFTWARE
ARG A:25 , LYS A:29 , ARG A:63
BINDING SITE FOR RESIDUE SO4 A 502
4
AC4
SOFTWARE
LYS A:101
BINDING SITE FOR RESIDUE SO4 A 503
5
AC5
SOFTWARE
ARG A:285 , ARG A:289 , SER A:295 , HOH A:630
BINDING SITE FOR RESIDUE SO4 A 504
6
AC6
SOFTWARE
GLY A:306 , ARG A:309 , HOH A:631
BINDING SITE FOR RESIDUE SO4 A 505
7
AC7
SOFTWARE
ALA A:115 , SER A:116 , ARG A:117 , CYS A:243
BINDING SITE FOR RESIDUE SO4 A 510
8
AC8
SOFTWARE
HIS A:286 , HOH A:661
BINDING SITE FOR RESIDUE ZN A 401
9
AC9
SOFTWARE
HIS A:94 , HIS A:98 , SO4 A:500
BINDING SITE FOR RESIDUE ZN A 402
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: ANNEXIN (A:32-84|A:104-156|A:188-240|A:263-...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANNEXIN
PS00223
Annexins repeated domain signature.
ANXA5_CHICK
32-84
104-156
188-240
263-315
4
A:32-84
A:104-156
A:188-240
A:263-315
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1yj0a_ (A:)
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Protein Domains
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)
Class
:
All alpha proteins
(14657)
Fold
:
Annexin
(61)
Superfamily
:
Annexin
(61)
Family
:
Annexin
(56)
Protein domain
:
Annexin V
(31)
Chicken (Gallus gallus) [TaxId: 9031]
(3)
1a
d1yj0a_
A:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1yj0A02 (A:87-160)
1b: CATH_1yj0A03 (A:161-246)
1c: CATH_1yj0A01 (A:14-86)
1d: CATH_1yj0A04 (A:247-319)
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)
Organisms
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)
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)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Annexin V; domain 1
(80)
Homologous Superfamily
:
[code=1.10.220.10, no name defined]
(58)
Chicken (Gallus gallus)
(3)
1a
1yj0A02
A:87-160
1b
1yj0A03
A:161-246
1c
1yj0A01
A:14-86
1d
1yj0A04
A:247-319
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Annexin_1yj0A01 (A:250-315)
1b: PFAM_Annexin_1yj0A02 (A:250-315)
1c: PFAM_Annexin_1yj0A03 (A:250-315)
1d: PFAM_Annexin_1yj0A04 (A:250-315)
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Clans
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Clan
:
no clan defined [family: Annexin]
(14)
Family
:
Annexin
(14)
Gallus gallus (Chicken)
(2)
1a
Annexin-1yj0A01
A:250-315
1b
Annexin-1yj0A02
A:250-315
1c
Annexin-1yj0A03
A:250-315
1d
Annexin-1yj0A04
A:250-315
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Asymmetric Unit 1
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Asym.Unit (58 KB)
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