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1YG0
Asym. Unit
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Asym.Unit (22 KB)
Biol.Unit 1 (20 KB)
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(1)
Title
:
SOLUTION STRUCTURE OF APO-COPP FROM HELICOBACTER PYLORI
Authors
:
B. J. Lee, S. J. Park
Date
:
04 Jan 05 (Deposition) - 24 Jan 06 (Release) - 13 Jul 11 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Open-Faced Beta-Sandwich, Missing C-Terminal Beta-Sheet, Metal Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. J. Lee, S. J. Park
Solution Structure Of Apo-Copp From Helicobacter Pylori
To Be Published
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(6, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_COPP_HELPY_001 (A3V, chain A, )
2: VAR_COPP_HELPY_002 (N13D, chain A, )
3: VAR_COPP_HELPY_003 (N13S, chain A, )
4: VAR_COPP_HELPY_004 (V34A, chain A, )
5: VAR_COPP_HELPY_005 (S35N, chain A, )
6: VAR_COPP_HELPY_006 (V66I, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_COPP_HELPY_001
*
A
3
V
COPP_HELPY
---
---
A
A
3
V
2
UniProt
VAR_COPP_HELPY_002
*
N
13
D
COPP_HELPY
---
---
A
N
13
D
3
UniProt
VAR_COPP_HELPY_003
*
N
13
S
COPP_HELPY
---
---
A
N
13
S
4
UniProt
VAR_COPP_HELPY_004
*
V
34
A
COPP_HELPY
---
---
A
V
34
A
5
UniProt
VAR_COPP_HELPY_005
*
S
35
N
COPP_HELPY
---
---
A
S
35
N
6
UniProt
VAR_COPP_HELPY_006
*
V
66
I
COPP_HELPY
---
---
A
V
66
I
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: HMA_2 (A:2-66)
2: HMA_1 (A:7-36)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HMA_2
PS50846
Heavy-metal-associated domain profile.
COPP_HELPY
2-66
1
A:2-66
2
HMA_1
PS01047
Heavy-metal-associated domain.
COPP_HELPY
7-36
1
A:7-36
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1yg0A00 (A:1-66)
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)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.100, no name defined]
(82)
Helicobacter pylori 26695. Organism_taxid: 85962. Strain: 26695.
(1)
1a
1yg0A00
A:1-66
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_HMA_1yg0A01 (A:4-64)
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Clan
:
no clan defined [family: HMA]
(41)
Family
:
HMA
(41)
Helicobacter pylori (Campylobacter pylori)
(1)
1a
HMA-1yg0A01
A:4-64
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Asymmetric Unit 1
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