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1Y2I
Asym. Unit
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Asym.Unit (98 KB)
Biol.Unit 1 (91 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MCSG TARGET APC27401 FROM SHIGELLA FLEXNERI
Authors
:
J. S. Brunzelle, G. Minasov, X. Yang, L. Shuvalova, F. R. Collart, W. F. Anderson, Midwest Center For Structural Genomics (Mcsg)
Date
:
22 Nov 04 (Deposition) - 04 Jan 05 (Release) - 17 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,C,D,E (1x)
Keywords
:
Structural Genomics, Pentamer, Hypothetical Protein, Protein Structure Initiative, Psi, Midwest Center For Structural Genomics, Mcsg, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. S. Brunzelle, G. Minasov, X. Yang, L. Shuvalova, F. R. Collart, W. F. Anderson, Midwest Center For Structural Genomics (Mcsg)
Crystal Structure Of Mcsg Target Apc27401 From Shigella Flexneri
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 15)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
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No.
Name
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Type
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1
MSE
15
Mod. Amino Acid
SELENOMETHIONINE
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Sites
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 5)
Info
All SCOP Domains
1a: SCOP_d1y2ia_ (A:)
1b: SCOP_d1y2ib_ (B:)
1c: SCOP_d1y2ic_ (C:)
1d: SCOP_d1y2id_ (D:)
1e: SCOP_d1y2ie_ (E:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Dodecin subunit-like
(56)
Superfamily
:
YbjQ-like
(4)
Family
:
YbjQ-like
(3)
Protein domain
:
Hypothetical protein YbjQ
(1)
Shigella flexneri [TaxId: 623]
(1)
1a
d1y2ia_
A:
1b
d1y2ib_
B:
1c
d1y2ic_
C:
1d
d1y2id_
D:
1e
d1y2ie_
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CATH Domains
(1, 5)
Info
all CATH domains
1a: CATH_1y2iA00 (A:2-109)
1b: CATH_1y2iB00 (B:2-109)
1c: CATH_1y2iC00 (C:2-109)
1d: CATH_1y2iD00 (D:2-109)
1e: CATH_1y2iE00 (E:2-109)
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Translation Initiation Factor IF3
(34)
Homologous Superfamily
:
Hypothetical protein apc22750. Chain B
(3)
2457t (Shigella flexneri 2a str)
(1)
1a
1y2iA00
A:2-109
1b
1y2iB00
B:2-109
1c
1y2iC00
C:2-109
1d
1y2iD00
D:2-109
1e
1y2iE00
E:2-109
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Pfam Domains
(1, 5)
Info
all PFAM domains
1a: PFAM_YbjQ_1_1y2iE01 (E:1-105)
1b: PFAM_YbjQ_1_1y2iE02 (E:1-105)
1c: PFAM_YbjQ_1_1y2iE03 (E:1-105)
1d: PFAM_YbjQ_1_1y2iE04 (E:1-105)
1e: PFAM_YbjQ_1_1y2iE05 (E:1-105)
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Clan
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YbjQ-like
(3)
Family
:
YbjQ_1
(2)
Shigella flexneri
(1)
1a
YbjQ_1-1y2iE01
E:1-105
1b
YbjQ_1-1y2iE02
E:1-105
1c
YbjQ_1-1y2iE03
E:1-105
1d
YbjQ_1-1y2iE04
E:1-105
1e
YbjQ_1-1y2iE05
E:1-105
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Asym.Unit (98 KB)
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