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1XWW
Asym. Unit
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Asym.Unit (34 KB)
Biol.Unit 1 (30 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN B-FORM LOW MOLECULAR WEIGHT PHOSPHOTYROSYL PHOSPHATASE AT 1.6 ANGSTROM RESOLUTION
Authors
:
C. V. Stauffacher, A. P. R. Zabell
Date
:
02 Nov 04 (Deposition) - 01 Nov 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.63
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. P. Zabell, A. D. Schroff, B. E. Bain, R. L. Van Etten, O. Wiest, C. V. Stauffacher
Crystal Structure Of The Human B-Form Low Molecular Weight Phosphotyrosyl Phosphatase At 1. 6-A Resolution.
J. Biol. Chem. V. 281 6520 2006
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
2a: SULFATE ION (SO4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:12 , LEU A:13 , GLY A:14 , ASN A:15 , ILE A:16 , CYS A:17 , ARG A:18 , ASP A:129
BINDING SITE FOR RESIDUE SO4 A 201
2
AC2
SOFTWARE
LEU A:29 , TYR A:142 , ARG A:150 , HOH A:221 , HOH A:319 , HOH A:322
BINDING SITE FOR RESIDUE GOL A 202
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_050526 (K6N, chain A, )
2: VAR_006171 (Q105R, chain A, )
3: VAR_050527 (S136F, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_050526
K
7
N
PPAC_HUMAN
Polymorphism
11691572
A
K
6
N
2
UniProt
VAR_006171
Q
106
R
PPAC_HUMAN
Polymorphism
7576247
A
Q
105
R
3
UniProt
VAR_050527
S
137
F
PPAC_HUMAN
Polymorphism
35569198
A
S
136
F
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
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Exons
(6, 6)
Info
All Exons
Exon 1.2c (A:1-14)
Exon 1.5 (A:14-38)
Exon 1.6b (A:39-76)
Exon 1.8c (A:77-97)
Exon 1.9 (A:97-132)
Exon 1.10f (A:133-157)
View:
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All Exon Boundaries
1: Boundary -/1.2c
2: Boundary 1.2c/1.5
3: Boundary 1.5/1.6b
4: Boundary 1.6b/1.8c
5: Boundary 1.8c/1.9
6: Boundary 1.9/1.10f
7: Boundary 1.10f/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2c
ENST00000272065
2c
ENSE00001907935
chr2:
264872-265007
136
PPAC_HUMAN
1-15
15
1
A:1-14
14
1.5
ENST00000272065
5
ENSE00001617949
chr2:
271866-271939
74
PPAC_HUMAN
15-39
25
1
A:14-38
25
1.6b
ENST00000272065
6b
ENSE00001704285
chr2:
272037-272150
114
PPAC_HUMAN
40-77
38
1
A:39-76
38
1.8c
ENST00000272065
8c
ENSE00001653664
chr2:
275140-275201
62
PPAC_HUMAN
78-98
21
1
A:77-97
21
1.9
ENST00000272065
9
ENSE00001680540
chr2:
276980-277085
106
PPAC_HUMAN
98-133
36
1
A:97-132
36
1.10f
ENST00000272065
10f
ENSE00001380378
chr2:
277227-278283
1057
PPAC_HUMAN
134-158
25
1
A:133-157
25
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1xwwa_ (A:)
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)
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)
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)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Phosphotyrosine protein phosphatases I-like
(60)
Superfamily
:
Phosphotyrosine protein phosphatases I
(50)
Family
:
Low-molecular-weight phosphotyrosine protein phosphatases
(29)
Protein domain
:
Tyrosine phosphatase
(15)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1xwwa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1xwwA00 (A:1-157)
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Classes
(
)
(
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)
Topologies
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)
(
)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.270, no name defined]
(36)
Human (Homo sapiens)
(2)
1a
1xwwA00
A:1-157
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_LMWPc_1xwwA01 (A:8-153)
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Clan
:
no clan defined [family: LMWPc]
(24)
Family
:
LMWPc
(24)
Homo sapiens (Human)
(1)
1a
LMWPc-1xwwA01
A:8-153
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Asymmetric Unit 1
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