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1XU7
Biol. Unit 3
Info
Asym.Unit (186 KB)
Biol.Unit 1 (178 KB)
Biol.Unit 2 (91 KB)
Biol.Unit 3 (92 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE INTERFACE OPEN CONFORMATION OF TETRAMERIC 11B-HSD1
Authors
:
D. J. Hosfield, Y. Wu, R. J. Skene, M. Hilger, A. Jennings, G. P. Snell, K. Aertgeerts
Date
:
25 Oct 04 (Deposition) - 02 Nov 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
11B-Hsd1, Sdr, Dehydrogenase, Hydroxysteroid, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. J. Hosfield, Y. Wu, R. J. Skene, M. Hilger, A. Jennings, G. P. Snell, K. Aertgeerts
Conformational Flexibility In Crystal Structures Of Human 11Beta-Hydroxysteroid Dehydrogenase Type I Provide Insights Into Glucocorticoid Interconversion And Enzyme Regulation.
J. Biol. Chem. V. 280 4639 2005
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSa)
1b: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSb)
1c: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSc)
1d: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSd)
1e: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSe)
1f: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMO... (CPSf)
2a: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPa)
2b: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPb)
2c: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPc)
2d: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CPS
3
Ligand/Ion
3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE
2
NDP
2
Ligand/Ion
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC9 (SOFTWARE)
6: BC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:41 , SER A:43 , LYS A:44 , GLY A:45 , ILE A:46 , ALA A:65 , ARG A:66 , SER A:67 , THR A:92 , MET A:93 , ASN A:119 , HIS A:120 , ILE A:121 , VAL A:168 , SER A:169 , SER A:170 , TYR A:183 , LYS A:187 , LEU A:215 , GLY A:216 , LEU A:217 , ILE A:218 , THR A:220 , THR A:222 , ALA A:223 , CPS A:523 , HOH A:536 , HOH A:543 , HOH A:557 , HOH A:597 , HOH A:618 , HOH A:685 , HOH A:744 , HOH A:797 , HOH A:803 , HOH A:964
BINDING SITE FOR RESIDUE NDP A 522
2
AC2
SOFTWARE
ILE A:121 , LEU A:171 , TYR A:177 , TYR A:183 , LEU A:217 , ALA A:223 , VAL A:227 , GLN A:234 , SER A:260 , SER A:261 , THR A:264 , NDP A:522 , HOH A:546 , HOH A:580 , TYR B:280 , HOH B:921
BINDING SITE FOR RESIDUE CPS A 523
3
AC3
SOFTWARE
GLY B:41 , SER B:43 , LYS B:44 , GLY B:45 , ILE B:46 , ALA B:65 , ARG B:66 , SER B:67 , THR B:92 , MET B:93 , ASN B:119 , HIS B:120 , ILE B:121 , VAL B:168 , SER B:169 , SER B:170 , TYR B:183 , LYS B:187 , LEU B:215 , GLY B:216 , ILE B:218 , THR B:220 , THR B:222 , ALA B:223 , CPS B:525 , HOH B:567 , HOH B:575 , HOH B:617 , HOH B:642 , HOH B:686 , HOH B:741 , HOH B:795 , HOH B:820 , HOH B:830 , HOH B:945 , HOH B:1000
BINDING SITE FOR RESIDUE NDP B 524
4
AC4
SOFTWARE
TYR A:280 , HOH A:861 , ILE B:121 , LEU B:171 , TYR B:177 , TYR B:183 , LEU B:217 , ALA B:223 , MET B:233 , GLN B:234 , THR B:264 , NDP B:524 , HOH B:550 , HOH B:823
BINDING SITE FOR RESIDUE CPS B 525
5
AC9
SOFTWARE
PRO A:271 , SER A:272 , ILE A:275 , HOH A:998 , LEU C:266 , PRO C:271 , SER D:272
BINDING SITE FOR RESIDUE CPS A 1
6
BC1
SOFTWARE
LEU A:266 , SER B:272 , PRO C:271 , SER C:272 , ILE C:275
BINDING SITE FOR RESIDUE CPS C 2
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SAPs(SNPs)/Variants
(2, 4)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_035845 (V148E, chain A/B, )
2: VAR_DHI1_HUMAN_CCDS1489_1_01 (V148E, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_035845
V
148
E
DHI1_HUMAN
Unclassified
---
A/B
V
148
E
2
CancerSNP
VAR_DHI1_HUMAN_CCDS1489_1_01
*
V
148
E
DHI1_HUMAN
Disease (Breast cancer)
---
A/B
V
148
E
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: ADH_SHORT (A:170-198,B:170-198)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADH_SHORT
PS00061
Short-chain dehydrogenases/reductases family signature.
DHI1_HUMAN
170-198
2
A:170-198
B:170-198
-
-
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1xu7a_ (A:)
1b: SCOP_d1xu7c_ (C:)
1c: SCOP_d1xu7d_ (D:)
1d: SCOP_d1xu7b_ (B:)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
11-beta-hydroxysteroid dehydrogenase 1
(34)
Human (Homo sapiens) [TaxId: 9606]
(25)
1a
d1xu7a_
A:
1b
d1xu7c_
C:
1c
d1xu7d_
D:
1d
d1xu7b_
B:
[
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1xu7D00 (D:21-281)
1b: CATH_1xu7B00 (B:21-282)
1c: CATH_1xu7C00 (C:21-282)
1d: CATH_1xu7A00 (A:21-283)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Human (Homo sapiens)
(188)
1a
1xu7D00
D:21-281
1b
1xu7B00
B:21-282
1c
1xu7C00
C:21-282
1d
1xu7A00
A:21-283
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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set fontsize 20
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Show PDB file:
Asym.Unit (186 KB)
Header - Asym.Unit
Biol.Unit 1 (178 KB)
Header - Biol.Unit 1
Biol.Unit 2 (91 KB)
Header - Biol.Unit 2
Biol.Unit 3 (92 KB)
Header - Biol.Unit 3
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