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1XPL
Biol. Unit 1
Info
Asym.Unit (264 KB)
Biol.Unit 1 (131 KB)
Biol.Unit 2 (131 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS HMG-COA SYNTHASE WITH ACETOACETYL-COA AND ACETYLATED CYSTEINE
Authors
:
M. J. Theisen, I. Misra, D. Saadat, N. Campobasso, H. M. Miziorko, D. H. T. Harrison
Date
:
08 Oct 04 (Deposition) - 02 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Hmg-Coa Synthase, Hmgs, Coenzyme A, Thiolase Fold, Condensing Enzyme, Cholesterol Biosynthesis, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. J. Theisen, I. Misra, D. Saadat, N. Campobasso, H. M. Miziorko, D. H. T. Harrison
3-Hydroxy-3-Methylglutaryl-Coa Synthase Intermediate Complex Observed In "Real-Time"
Proc. Natl. Acad. Sci. Usa V. 47 16442 2004
(for further references see the
PDB file header
)
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: ACETOACETYL-COENZYME A (CAAa)
1b: ACETOACETYL-COENZYME A (CAAb)
1c: ACETOACETYL-COENZYME A (CAAc)
1d: ACETOACETYL-COENZYME A (CAAd)
2a: S-ACETYL-CYSTEINE (SCYa)
2b: S-ACETYL-CYSTEINE (SCYb)
2c: S-ACETYL-CYSTEINE (SCYc)
2d: S-ACETYL-CYSTEINE (SCYd)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
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Label:
No.
Name
Count
Type
Full Name
1
CAA
2
Ligand/Ion
ACETOACETYL-COENZYME A
2
SCY
2
Mod. Amino Acid
S-ACETYL-CYSTEINE
3
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:192 , TYR A:193
BINDING SITE FOR RESIDUE SO4 A 1501
2
AC2
SOFTWARE
GLY A:148 , HOH A:1530
BINDING SITE FOR RESIDUE SO4 A 1502
3
AC3
SOFTWARE
ASP A:29 , ASN A:31 , GLY A:36 , SCY A:111 , TYR A:143 , GLY A:148 , PHE A:185 , VAL A:196 , GLY A:198 , SER A:201 , TYR A:205 , HIS A:233 , PRO A:235 , PHE A:236 , MET A:239 , ASN A:275 , SER A:307 , HOH A:1523 , HOH A:1588 , HOH A:1599
BINDING SITE FOR RESIDUE CAA A 1401
4
AC4
SOFTWARE
HIS B:191 , LYS B:192 , TYR B:193 , HOH B:2622
BINDING SITE FOR RESIDUE SO4 B 2501
5
AC5
SOFTWARE
SER B:147 , GLY B:148 , HOH B:2536
BINDING SITE FOR RESIDUE SO4 B 2502
6
AC6
SOFTWARE
ASP B:29 , ASN B:31 , LYS B:32 , GLY B:36 , SCY B:111 , TYR B:143 , GLY B:148 , SER B:201 , HIS B:233 , PRO B:235 , PHE B:236 , MET B:239 , ASN B:275 , SER B:307 , HOH B:2529 , HOH B:2586
BINDING SITE FOR RESIDUE CAA B 2401
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1xpla1 (A:2-167)
1b: SCOP_d1xpla2 (A:168-388)
1c: SCOP_d1xplb1 (B:2-167)
1d: SCOP_d1xplb2 (B:168-388)
1e: SCOP_d1xplc1 (C:2-167)
1f: SCOP_d1xplc2 (C:168-388)
1g: SCOP_d1xpld1 (D:2-167)
1h: SCOP_d1xpld2 (D:168-388)
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
Chalcone synthase-like
(56)
Protein domain
:
3-hydroxy-3-methylglutaryl CoA synthase MvaS
(9)
Staphylococcus aureus [TaxId: 1280]
(5)
1a
d1xpla1
A:2-167
1b
d1xpla2
A:168-388
1c
d1xplb1
B:2-167
1d
d1xplb2
B:168-388
1e
d1xplc1
C:2-167
1f
d1xplc2
C:168-388
1g
d1xpld1
D:2-167
1h
d1xpld2
D:168-388
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (264 KB)
Header - Asym.Unit
Biol.Unit 1 (131 KB)
Header - Biol.Unit 1
Biol.Unit 2 (131 KB)
Header - Biol.Unit 2
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