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1XIO
Asym. Unit
Info
Asym.Unit (48 KB)
Biol.Unit 1 (43 KB)
Biol.Unit 2 (84 KB)
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(1)
Title
:
ANABAENA SENSORY RHODOPSIN
Authors
:
L. Vogeley, H. Luecke
Date
:
21 Sep 04 (Deposition) - 05 Oct 04 (Release) - 29 Oct 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Signaling Protein, Photoreceptor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
L. Vogeley, O. A. Sineshchekov, V. D. Trivedi, J. Sasaki, J. L. Spudich H. Luecke
Anabaena Sensory Rhodopsin: A Photochromic Color Sensor At 2. 0 A.
Science V. 306 1390 2004
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Hetero Components
(2, 14)
Info
All Hetero Components
1a: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEa)
1b: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEb)
1c: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEc)
1d: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEd)
1e: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEe)
1f: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEf)
1g: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEg)
1h: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEh)
1i: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEi)
1j: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEj)
1k: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEk)
1l: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEl)
1m: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEm)
2a: RETINAL (RETa)
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No.
Name
Count
Type
Full Name
1
PEE
13
Ligand/Ion
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
2
RET
1
Ligand/Ion
RETINAL
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TRP A:76 , THR A:80 , LEU A:83 , VAL A:112 , GLY A:116 , TYR A:132 , PHE A:139 , TRP A:176 , TYR A:179 , PRO A:180 , TRP A:183 , LYS A:210
BINDING SITE FOR RESIDUE RET A 301
02
AC2
SOFTWARE
MET A:1 , TRP A:9 , THR A:16
BINDING SITE FOR RESIDUE PEE A 302
03
AC3
SOFTWARE
TYR A:171
BINDING SITE FOR RESIDUE PEE A 303
04
AC4
SOFTWARE
LEU A:6
BINDING SITE FOR RESIDUE PEE A 304
05
AC5
SOFTWARE
TRP A:131
BINDING SITE FOR RESIDUE PEE A 305
06
AC6
SOFTWARE
TYR A:132 , ARG A:151 , ILE A:177
BINDING SITE FOR RESIDUE PEE A 306
07
AC7
SOFTWARE
TYR A:171 , VAL A:174 , LEU A:205
BINDING SITE FOR RESIDUE PEE A 307
08
AC8
SOFTWARE
VAL A:174 , ILE A:177
BINDING SITE FOR RESIDUE PEE A 308
09
AC9
SOFTWARE
TRP A:99 , THR A:100 , SER A:107 , PRO A:149
BINDING SITE FOR RESIDUE PEE A 309
10
BC1
SOFTWARE
THR A:16 , TRP A:23 , ILE A:45 , LEU A:49
BINDING SITE FOR RESIDUE PEE A 312
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1xioa_ (A:)
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Protein Domains
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Organisms
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(
)
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Family A G protein-coupled receptor-like
(138)
Superfamily
:
Family A G protein-coupled receptor-like
(138)
Family
:
Bacteriorhodopsin-like
(107)
Protein domain
:
Sensory rhodopsin
(1)
Nostoc sp. PCC 7120 [TaxId: 103690]
(1)
1a
d1xioa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1xioA00 (A:1-226)
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Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Rhopdopsin 7-helix transmembrane proteins
(128)
Homologous Superfamily
:
Rhopdopsin 7-helix transmembrane proteins
(128)
Pcc 7120 (Nostoc sp)
(1)
1a
1xioA00
A:1-226
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Bac_rhodopsin_1xioA01 (A:5-226)
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Clans
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Clan
:
GPCR_A
(90)
Family
:
Bac_rhodopsin
(43)
Nostoc sp. (strain PCC 7120 / UTEX 2576)
(1)
1a
Bac_rhodopsin-1xioA01
A:5-226
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Asymmetric Unit 1
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Asym.Unit (48 KB)
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