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1X4E
Asym. Unit
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Asym.Unit (413 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF RRM DOMAIN IN RNA BINDING MOTIF, SINGLE-STRANDED INTERACTING PROTEIN 2
Authors
:
F. He, Y. Muto, M. Inoue, T. Kigawa, M. Shirouzu, T. Terada, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
14 May 05 (Deposition) - 14 Nov 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Nmr, Structural Genomics, Rrm Domain, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Rna Binding Protein
(Keyword Search:
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Reference
:
F. He, Y. Muto, M. Inoue, T. Kigawa, M. Shirouzu, T. Terada, S. Yokoyama
Solution Structure Of Rrm Domain In Rna Binding Motif, Single-Stranded Interacting Protein 2
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: RRM (A:8-79|A:80-85)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RRM
PS50102
Eukaryotic RNA Recognition Motif (RRM) profile.
RBMS2_HUMAN
56-129
135-220
2
A:8-79
A:80-85
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Exons
(4, 4)
Info
All Exons
Exon 1.2 (A:1-28 (gaps))
Exon 1.3 (A:28-48)
Exon 1.4 (A:48-78)
Exon 1.5 (A:79-85 (gaps))
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1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000262031
1
ENSE00001261042
chr12:
56915609-56915873
265
RBMS2_HUMAN
1-22
22
0
-
-
1.2
ENST00000262031
2
ENSE00001117542
chr12:
56956201-56956367
167
RBMS2_HUMAN
23-78
56
1
A:1-28 (gaps)
36
1.3
ENST00000262031
3
ENSE00001117543
chr12:
56962759-56962817
59
RBMS2_HUMAN
78-98
21
1
A:28-48
21
1.4
ENST00000262031
4
ENSE00001705217
chr12:
56963683-56963774
92
RBMS2_HUMAN
98-128
31
1
A:48-78
31
1.5
ENST00000262031
5
ENSE00001117546
chr12:
56965482-56965639
158
RBMS2_HUMAN
129-181
53
1
A:79-85 (gaps)
48
1.6
ENST00000262031
6
ENSE00000920387
chr12:
56974968-56975047
80
RBMS2_HUMAN
181-208
28
0
-
-
1.7
ENST00000262031
7
ENSE00000920388
chr12:
56975183-56975292
110
RBMS2_HUMAN
208-244
37
0
-
-
1.8
ENST00000262031
8
ENSE00000920389
chr12:
56975617-56975663
47
RBMS2_HUMAN
245-260
16
0
-
-
1.9
ENST00000262031
9
ENSE00000920390
chr12:
56975843-56975936
94
RBMS2_HUMAN
260-291
32
0
-
-
1.10
ENST00000262031
10
ENSE00001117541
chr12:
56980633-56980710
78
RBMS2_HUMAN
292-317
26
0
-
-
1.11
ENST00000262031
11
ENSE00001117544
chr12:
56981338-56981448
111
RBMS2_HUMAN
318-354
37
0
-
-
1.12
ENST00000262031
12
ENSE00001117548
chr12:
56982078-56982158
81
RBMS2_HUMAN
355-381
27
0
-
-
1.13
ENST00000262031
13
ENSE00001261036
chr12:
56982716-56982802
87
RBMS2_HUMAN
382-407
26
0
-
-
1.14
ENST00000262031
14
ENSE00001260979
chr12:
56982924-56989980
7057
RBMS2_HUMAN
-
0
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1x4ea1 (A:8-79)
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
RNA-binding domain, RBD
(289)
Family
:
Canonical RBD
(214)
Protein domain
:
RNA-binding motif, single-stranded-interacting protein 2, RBMS2
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1x4ea1
A:8-79
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CATH Domains
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_RRM_1_1x4eA01 (A:8-74)
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Clan
:
RRM
(206)
Family
:
RRM_1
(131)
Homo sapiens (Human)
(94)
1a
RRM_1-1x4eA01
A:8-74
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