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1WVU
Biol. Unit 2
Info
Asym.Unit (81 KB)
Biol.Unit 1 (36 KB)
Biol.Unit 2 (224 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CHITINASE C FROM STREPTOMYCES GRISEUS HUT6037
Authors
:
Y. Kezuka, T. Watanabe, T. Nonaka
Date
:
27 Dec 04 (Deposition) - 27 Dec 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.45
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: A,B (3x)
Keywords
:
Family 19 Chitinase, Whole Structure, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Kezuka, M. Ohishi, Y. Itoh, J. Watanabe, M. Mitsutomi, T. Watanabe, T. Nonaka
Structural Studies Of A Two-Domain Chitinase From Streptomyces Griseus Hut6037
J. Mol. Biol. V. 358 472 2006
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
1k: CHLORIDE ION (CLk)
1l: CHLORIDE ION (CLl)
1m: CHLORIDE ION (CLm)
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:145 , HIS A:146 , LYS A:276 , GLN B:279
BINDING SITE FOR RESIDUE CL A 295
02
AC2
SOFTWARE
ILE B:154 , LYS B:155 , HOH B:339
BINDING SITE FOR RESIDUE CL B 295
03
AC3
SOFTWARE
ARG B:105 , THR B:110 , TYR B:111 , HOH B:379
BINDING SITE FOR RESIDUE CL B 296
04
AC4
SOFTWARE
GLU A:159 , LYS A:222
BINDING SITE FOR RESIDUE CL A 296
05
AC5
SOFTWARE
ASN A:275 , ASN B:104
BINDING SITE FOR RESIDUE CL A 297
06
AC6
SOFTWARE
TYR A:121 , PRO A:122 , ALA A:123
BINDING SITE FOR RESIDUE CL A 298
07
AC7
SOFTWARE
ARG A:105 , THR A:110 , TYR A:111 , HOH A:360
BINDING SITE FOR RESIDUE CL A 299
08
AC8
SOFTWARE
LYS A:155 , ASP A:216 , PRO A:217 , ALA A:218
BINDING SITE FOR RESIDUE CL A 300
09
AC9
SOFTWARE
THR B:287 , THR B:288
BINDING SITE FOR RESIDUE CL B 297
10
BC1
SOFTWARE
GLN B:178 , GLY B:203 , HOH B:337
BINDING SITE FOR RESIDUE CL B 298
11
BC2
SOFTWARE
GLN A:178 , GLY A:203 , HOH A:350
BINDING SITE FOR RESIDUE CL A 301
12
BC3
SOFTWARE
ASN A:266 , ASN B:266 , GLN B:269
BINDING SITE FOR RESIDUE CL A 302
13
BC4
SOFTWARE
TYR B:121 , PRO B:122 , ALA B:123 , HOH B:318
BINDING SITE FOR RESIDUE CL B 299
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1wvua_ (A:)
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(
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)
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)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Lysozyme-like
(1361)
Superfamily
:
Lysozyme-like
(1361)
Family
:
automated matches
(18)
Protein domain
:
automated matches
(18)
Streptomyces griseus [TaxId: 1911]
(3)
1a
d1wvua_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1wvuA02 (A:155-215)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Endochitinase; domain 2
(16)
Homologous Superfamily
:
Endochitinase, domain 2
(16)
Streptomyces griseus. Organism_taxid: 1911.
(3)
1a
1wvuA02
A:155-215
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Pfam Domains
(2, 3)
Info
all PFAM domains
1a: PFAM_Glyco_hydro_19_1wvuB01 (B:92-294)
1b: PFAM_Glyco_hydro_19_1wvuB02 (B:92-294)
2a: PFAM_CBM_5_12_1wvuB03 (B:33-72)
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Clans
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(
)
Organisms
(
)
(
)
Clan
:
Lysozyme
(266)
Family
:
Glyco_hydro_19
(5)
Streptomyces griseus
(2)
1a
Glyco_hydro_19-1wvuB01
B:92-294
1b
Glyco_hydro_19-1wvuB02
B:92-294
Clan
:
no clan defined [family: CBM_5_12]
(10)
Family
:
CBM_5_12
(10)
Streptomyces griseus
(2)
2a
CBM_5_12-1wvuB03
B:33-72
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Asym.Unit (81 KB)
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