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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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Getting 'Site' information from database.
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Getting 'PROSITE' information from database.
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Getting 'Exon' information from database.
1WL5
Asym. Unit
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Asym.Unit (70 KB)
Biol.Unit 1 (255 KB)
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(1)
Title
:
HUMAN CYTOSOLIC ACETOACETYL-COA THIOLASE
Authors
:
P. Kursula, T. Fukao, N. Kondo, R. K. Wierenga
Date
:
20 Jun 04 (Deposition) - 01 Mar 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.26
Chains
:
Asym. Unit : A
Biol. Unit 1: A (4x)
Keywords
:
Thiolase Fold, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Kursula, H. Sikkila, T. Fukao, N. Kondo, R. K. Wierenga
High Resolution Crystal Structures Of Human Cytosolic Thiolase (Ct): A Comparison Of The Active Sites Of Human Ct Bacterial Thiolase, And Bacterial Kas I
J. Mol. Biol. V. 347 189 2005
[
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: S-HYDROXYCYSTEINE (CSOa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CSO
1
Mod. Amino Acid
S-HYDROXYCYSTEINE
2
GOL
2
Ligand/Ion
GLYCEROL
3
SO4
3
Ligand/Ion
SULFATE ION
[
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:12 , ALA A:13 , ARG A:44 , LEU A:277 , ASN A:338 , HIS A:368 , HOH A:2109 , HOH A:2144 , HOH A:2149 , HOH A:2169
BINDING SITE FOR RESIDUE SO4 A 1001
2
AC2
SOFTWARE
TYR A:81 , HIS A:156 , GLU A:289 , PRO A:290 , SER A:291 , HOH A:2133
BINDING SITE FOR RESIDUE SO4 A 1002
3
AC3
SOFTWARE
GLU A:215 , LYS A:217 , THR A:218 , HOH A:2232
BINDING SITE FOR RESIDUE SO4 A 1003
4
AC4
SOFTWARE
LEU A:151 , GLY A:253
BINDING SITE FOR RESIDUE GOL A 2001
5
AC5
SOFTWARE
LEU A:184 , GLU A:322 , VAL A:332 , ASN A:343 , HOH A:2241
BINDING SITE FOR RESIDUE GOL A 2002
[
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_019686 (K211R, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_019686
K
211
R
THIC_HUMAN
Polymorphism
25683
A
K
211
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: THIOLASE_2 (A:343-359)
2: THIOLASE_3 (A:378-391)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
THIOLASE_2
PS00737
Thiolases signature 2.
THIC_HUMAN
343-359
1
A:343-359
2
THIOLASE_3
PS00099
Thiolases active site.
THIC_HUMAN
378-391
1
A:378-391
[
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Exons
(9, 9)
Info
All Exons
Exon 1.1 (A:4-19)
Exon 1.3 (A:19-64)
Exon 1.4 (A:64-124)
Exon 1.5 (A:125-164)
Exon 1.6b (A:164-212)
Exon 1.6d (A:212-253)
Exon 1.7 (A:253-304)
Exon 1.8 (A:305-341)
Exon 1.9b (A:342-397)
View:
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All Exon Boundaries
01: Boundary -/1.1
02: Boundary 1.1/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5
05: Boundary 1.5/1.6b
06: Boundary 1.6b/1.6d
07: Boundary 1.6d/1.7
08: Boundary 1.7/1.8
09: Boundary 1.8/1.9b
10: Boundary 1.9b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000367048
1
ENSE00001510952
chr6:
160181360-160183174
1815
THIC_HUMAN
1-19
19
1
A:4-19
16
1.3
ENST00000367048
3
ENSE00002148943
chr6:
160183951-160184085
135
THIC_HUMAN
19-64
46
1
A:19-64
46
1.4
ENST00000367048
4
ENSE00002146412
chr6:
160188037-160188218
182
THIC_HUMAN
64-124
61
1
A:64-124
61
1.5
ENST00000367048
5
ENSE00002146388
chr6:
160189543-160189660
118
THIC_HUMAN
125-164
40
1
A:125-164
40
1.6b
ENST00000367048
6b
ENSE00000765642
chr6:
160196202-160196345
144
THIC_HUMAN
164-212
49
1
A:164-212
49
1.6d
ENST00000367048
6d
ENSE00000765643
chr6:
160197182-160197304
123
THIC_HUMAN
212-253
42
1
A:212-253
42
1.7
ENST00000367048
7
ENSE00002165191
chr6:
160198334-160198488
155
THIC_HUMAN
253-304
52
1
A:253-304
52
1.8
ENST00000367048
8
ENSE00002140965
chr6:
160199202-160199312
111
THIC_HUMAN
305-341
37
1
A:305-341
37
1.9b
ENST00000367048
9b
ENSE00001923516
chr6:
160199691-160200087
397
THIC_HUMAN
342-397
56
1
A:342-397
56
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1wl5a1 (A:4-271)
1b: SCOP_d1wl5a2 (A:272-397)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
automated matches
(108)
Protein domain
:
automated matches
(108)
Human (Homo sapiens) [TaxId: 9606]
(6)
1a
d1wl5a1
A:4-271
1b
d1wl5a2
A:272-397
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1wl5A01 (A:4-127,A:197-280)
1b: CATH_1wl5A02 (A:155-196,A:281-394)
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)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Peroxisomal Thiolase; Chain A, domain 1
(130)
Homologous Superfamily
:
[code=3.40.47.10, no name defined]
(130)
Human (Homo sapiens)
(12)
1a
1wl5A01
A:4-127,A:197-280
1b
1wl5A02
A:155-196,A:281-394
[
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Thiolase_C_1wl5A01 (A:274-396)
2a: PFAM_Thiolase_N_1wl5A02 (A:5-267)
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Clans
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Families
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(
)
Organisms
(
)
(
)
Clan
:
Thiolase
(72)
Family
:
Thiolase_C
(23)
Homo sapiens (Human)
(2)
1a
Thiolase_C-1wl5A01
A:274-396
Family
:
Thiolase_N
(23)
Homo sapiens (Human)
(2)
2a
Thiolase_N-1wl5A02
A:5-267
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Chain A
Asymmetric Unit 1
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