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1WIZ
Asym. Unit
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Asym.Unit (523 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE FIRST CUT DOMAIN OF KIAA1034 PROTEIN
Authors
:
K. Inoue, S. Nameki, F. Hayashi, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 May 04 (Deposition) - 28 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Helix Bundle, Satb2, Kiaa1034 Protein, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Dna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Inoue, S. Nameki, F. Hayashi, T. Kigawa, S. Yokoyama
Solution Structure Of The First Cut Domain Of Kiaa1034 Protein
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_059320 (S2P, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_059320
S
263
P
SATB2_HUMAN
Polymorphism
12619995
A
S
2
P
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: CUT (A:8-95|-)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CUT
PS51042
CUT domain profile.
SATB2_HUMAN
350-437
473-560
1
A:8-95
-
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Exons
(2, 2)
Info
All Exons
Exon 1.13a (A:1-49 (gaps))
Exon 1.14c (A:50-101 (gaps))
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All Exon Boundaries
1: Boundary 1.12d/1.13a
2: Boundary 1.13a/1.14c
3: Boundary 1.14c/1.17
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2b
ENST00000260926
2b
ENSE00001551754
chr2:
200329831-200329559
273
SATB2_HUMAN
-
0
0
-
-
1.3
ENST00000260926
3
ENSE00001402939
chr2:
200325255-200325175
81
SATB2_HUMAN
-
0
0
-
-
1.5b
ENST00000260926
5b
ENSE00002187581
chr2:
200320819-200320592
228
SATB2_HUMAN
1-57
57
0
-
-
1.6a
ENST00000260926
6a
ENSE00000964856
chr2:
200298237-200298061
177
SATB2_HUMAN
57-116
60
0
-
-
1.10
ENST00000260926
10
ENSE00000964857
chr2:
200246543-200246417
127
SATB2_HUMAN
116-158
43
0
-
-
1.11
ENST00000260926
11
ENSE00000934554
chr2:
200245210-200245087
124
SATB2_HUMAN
158-199
42
0
-
-
1.12d
ENST00000260926
12d
ENSE00000934553
chr2:
200233430-200233328
103
SATB2_HUMAN
200-234
35
0
-
-
1.13a
ENST00000260926
13a
ENSE00000934548
chr2:
200213896-200213424
473
SATB2_HUMAN
234-391
158
1
A:1-49 (gaps)
130
1.14c
ENST00000260926
14c
ENSE00000934547
chr2:
200193633-200193421
213
SATB2_HUMAN
392-462
71
1
A:50-101 (gaps)
67
1.17
ENST00000260926
17
ENSE00000934544
chr2:
200188681-200188526
156
SATB2_HUMAN
463-514
52
0
-
-
1.18b
ENST00000260926
18b
ENSE00000934543
chr2:
200173680-200173483
198
SATB2_HUMAN
515-580
66
0
-
-
1.19c
ENST00000260926
19c
ENSE00001156800
chr2:
200137395-200134231
3165
SATB2_HUMAN
581-733
153
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1wiza_ (A:)
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Protein Domains
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(
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Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
lambda repressor-like DNA-binding domains
(180)
Superfamily
:
lambda repressor-like DNA-binding domains
(180)
Family
:
CUT domain
(10)
Protein domain
:
DNA-binding protein SATB2
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1wiza_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (523 KB)
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