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1UMJ
Biol. Unit 2
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Asym.Unit (42 KB)
Biol.Unit 1 (58 KB)
Biol.Unit 2 (20 KB)
Biol.Unit 3 (56 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII CUTA IN THE PRESENCE OF 3M GUANIDINE HYDROCHLORIDE
Authors
:
Y. Tanaka, K. Tsumoto, Y. Yasutake, N. Sakai, M. Yao, I. Tanaka, I. Kumag
Date
:
02 Oct 03 (Deposition) - 05 Oct 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (3x)
Biol. Unit 2: B (1x)
Biol. Unit 3: B (3x)
Keywords
:
Cuta, Copper Tolerance, Structural Genomics, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Tanaka, K. Tsumoto, M. Umetsu, T. Nakanishi, Y. Yasutake, N. Sakai, M. Yao, I. Tanaka, T. Arakawa, I. Kumagai
Structural Evidence For Guanidine-Protein Side Chain Interactions: Crystal Structure Of Cuta From Pyrococcus Horikoshii In 3M Guanidine Hydrochloride
Biochem. Biophys. Res. Commun. V. 323 185 2004
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: GUANIDINE (GAIa)
1b: GUANIDINE (GAIb)
1c: GUANIDINE (GAIc)
1d: GUANIDINE (GAId)
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No.
Name
Count
Type
Full Name
1
GAI
2
Ligand/Ion
GUANIDINE
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Sites
(2, 2)
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1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
ASP B:86 , GAI B:1004
BINDING SITE FOR RESIDUE GAI B 1003
2
AC4
SOFTWARE
ASP B:84 , ASP B:86 , GAI B:1003
BINDING SITE FOR RESIDUE GAI B 1004
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d1umja_ (A:)
1b: SCOP_d1umjb_ (B:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
GlnB-like
(79)
Family
:
Divalent ion tolerance proteins CutA (CutA1)
(22)
Protein domain
:
Cut A1
(14)
Pyrococcus horikoshii [TaxId: 53953]
(6)
1a
d1umja_
A:
1b
d1umjb_
B:
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_1umjA00 (A:1-101)
1b: CATH_1umjB00 (B:1-101)
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Class
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Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.830, no name defined]
(20)
Pyrococcus horikoshii ot3. Organism_taxid: 70601. Strain: ot3.
(6)
1a
1umjA00
A:1-101
1b
1umjB00
B:1-101
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_CutA1_1umjB01 (B:1-101)
1b: PFAM_CutA1_1umjB02 (B:1-101)
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Clan
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GlnB-like
(50)
Family
:
CutA1
(13)
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
(1)
1a
CutA1-1umjB01
B:1-101
1b
CutA1-1umjB02
B:1-101
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Asym.Unit (42 KB)
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