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1UJY
Asym. Unit
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Asym.Unit (385 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF SH3 DOMAIN IN RAC/CDC42 GUANINE NUCLEOTIDE EXCHANGE FACTOR(GEF) 6
Authors
:
F. He, Y. Muto, H. Uda, S. Koshiba, M. Shirouzu, T. Terada, T. Kigawa, M. Inoue, T. Yabuki, M. Aoki, E. Seki, T. Matsuda, H. Hirota, M. Yoshida N. Kobayashi, A. Tanaka, T. Osanai, Y. Matsuo, O. Ohara, T. Nagase, R. Kikuno, M. Nagayama, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
12 Aug 03 (Deposition) - 12 Feb 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Nmr, Structural Genomics, Sh3 Domain, Gef 6, Riken Structural Genomics/Proteomics Initiative, Rsgi, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. He, Y. Muto, H. Uda, S. Koshiba, M. Shirouzu, T. Terada, T. Kigawa, M. Inoue, T. Yabuki, M. Aoki, E. Seki, T. Matsuda, H. Hirota, M. Yoshida, N. Kobayashi, A. Tanaka, T. Osanai, Y. Matsuo, O. Ohara, T. Nagase, R. Kikuno, M. Nagayama, S. Yokoyama
Solution Structure Of Sh3 Domain In Rac/Cdc42 Guanine Nucleotide Exchange Factor(Gef) 6
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SH3 (A:8-67)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SH3
PS50002
Src homology 3 (SH3) domain profile.
ARHG6_HUMAN
160-219
1
A:8-67
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Exons
(3, 3)
Info
All Exons
Exon 1.6 (A:1-6)
Exon 1.7 (A:7-69)
Exon 1.8 (A:69-76 (gaps))
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All Exon Boundaries
1: Boundary 1.5/1.6
2: Boundary 1.6/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.9
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000250617
1
ENSE00000979461
X:135864247-135862877
1371
ARHG6_HUMAN
1-55
55
0
-
-
1.2
ENST00000250617
2
ENSE00000979462
X:135861656-135861573
84
ARHG6_HUMAN
56-83
28
0
-
-
1.5
ENST00000250617
5
ENSE00001750147
X:135829751-135829667
85
ARHG6_HUMAN
84-112
29
0
-
-
1.6
ENST00000250617
6
ENSE00001611860
X:135827506-135827382
125
ARHG6_HUMAN
112-153
42
1
A:1-6
6
1.7
ENST00000250617
7
ENSE00001771122
X:135825945-135825744
202
ARHG6_HUMAN
154-221
68
1
A:7-69
63
1.8
ENST00000250617
8
ENSE00000890637
X:135814331-135814261
71
ARHG6_HUMAN
221-244
24
1
A:69-76 (gaps)
19
1.9
ENST00000250617
9
ENSE00000890636
X:135795529-135795435
95
ARHG6_HUMAN
245-276
32
0
-
-
1.10
ENST00000250617
10
ENSE00000677037
X:135790929-135790834
96
ARHG6_HUMAN
276-308
33
0
-
-
1.11
ENST00000250617
11
ENSE00000890635
X:135789189-135789067
123
ARHG6_HUMAN
308-349
42
0
-
-
1.12
ENST00000250617
12
ENSE00000890634
X:135772907-135772769
139
ARHG6_HUMAN
349-395
47
0
-
-
1.13
ENST00000250617
13
ENSE00000890633
X:135770150-135770091
60
ARHG6_HUMAN
396-415
20
0
-
-
1.14
ENST00000250617
14
ENSE00000890632
X:135767982-135767836
147
ARHG6_HUMAN
416-464
49
0
-
-
1.15
ENST00000250617
15
ENSE00001617240
X:135765003-135764917
87
ARHG6_HUMAN
465-493
29
0
-
-
1.16
ENST00000250617
16
ENSE00000890630
X:135764127-135764049
79
ARHG6_HUMAN
494-520
27
0
-
-
1.17
ENST00000250617
17
ENSE00001246193
X:135763035-135762890
146
ARHG6_HUMAN
520-568
49
0
-
-
1.18
ENST00000250617
18
ENSE00000890628
X:135761819-135761694
126
ARHG6_HUMAN
569-610
42
0
-
-
1.19
ENST00000250617
19
ENSE00001436514
X:135760115-135760095
21
ARHG6_HUMAN
611-617
7
0
-
-
1.20
ENST00000250617
20
ENSE00001436482
X:135758876-135758783
94
ARHG6_HUMAN
618-649
32
0
-
-
1.21
ENST00000250617
21
ENSE00000890626
X:135757255-135757166
90
ARHG6_HUMAN
649-679
31
0
-
-
1.22
ENST00000250617
22
ENSE00000677022
X:135754278-135754179
100
ARHG6_HUMAN
679-712
34
0
-
-
1.23
ENST00000250617
23
ENSE00000677021
X:135751695-135751641
55
ARHG6_HUMAN
712-730
19
0
-
-
1.24
ENST00000250617
24
ENSE00001453176
X:135750328-135747706
2623
ARHG6_HUMAN
731-776
46
0
-
-
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SCOP Domains
(1, 1)
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1a: SCOP_d1ujya_ (A:)
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All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
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:
SH3-domain
(369)
Family
:
SH3-domain
(255)
Protein domain
:
Rac/CDC42 GEF 6
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1ujya_
A:
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CATH Domains
(1, 1)
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1a: CATH_1ujyA00 (A:1-76)
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Mainly Beta
(13760)
Architecture
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Roll
(1513)
Topology
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SH3 type barrels.
(648)
Homologous Superfamily
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SH3 Domains
(267)
Human (Homo sapiens)
(133)
1a
1ujyA00
A:1-76
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_SH3_2_1ujyA01 (A:12-65)
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SH3
(175)
Family
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SH3_2
(30)
Homo sapiens (Human)
(20)
1a
SH3_2-1ujyA01
A:12-65
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