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1U63
Asym. Unit
Info
Asym.Unit (117 KB)
Biol.Unit 1 (57 KB)
Biol.Unit 2 (56 KB)
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(1)
Title
:
THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-MRNA COMPLEX
Authors
:
N. Nevskaya, S. Tishchenko, A. Gabdoulkhakov, E. Nikonova, O. Nikonov A. Nikulin, M. Garber, S. Nikonov, W. Piendl
Date
:
29 Jul 04 (Deposition) - 12 Apr 05 (Release) - 30 Nov 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Ribosome, Ribosomal Protein, Mrna-Protein Complex, Transcription-Rna Complex
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Reference
:
N. Nevskaya, S. Tishchenko, A. Gabdoulkhakov, E. Nikonova, O. Nikonov, A. Nikulin, O. Platonova, M. Garber, S. Nikonov, W. Piendl
Ribosomal Protein L1 Recognizes The Same Specific Structura Motif In Its Target Sites On The Autoregulatory Mrna And 23 Rrna.
Nucleic Acids Res. V. 33 478 2005
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Hetero Components
(1, 12)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
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No.
Name
Count
Type
Full Name
1
MSE
12
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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PROSITE Patterns/Profiles
(1, 2)
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1: RIBOSOMAL_L1 (A:112-131,C:112-131)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RIBOSOMAL_L1
PS01199
Ribosomal protein L1 signature.
RL1_METJA
112-131
2
A:112-131
C:112-131
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1u63a1 (A:1-213)
1b: SCOP_d1u63c1 (C:1-213)
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Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Ribosomal protein L1
(18)
Superfamily
:
Ribosomal protein L1
(18)
Family
:
Ribosomal protein L1
(18)
Protein domain
:
Ribosomal protein L1
(18)
Methanococcus jannaschii [TaxId: 2190]
(3)
1a
d1u63a1
A:1-213
1b
d1u63c1
C:1-213
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1u63A01 (A:1-56,A:148-214)
1b: CATH_1u63C01 (C:1-56,C:148-214)
2a: CATH_1u63A02 (A:57-147)
2b: CATH_1u63C02 (C:57-147)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase
(42)
Homologous Superfamily
:
[code=3.30.190.20, no name defined]
(7)
[unclassified]
(3)
1a
1u63A01
A:1-56,A:148-214
1b
1u63C01
C:1-56,C:148-214
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.790, no name defined]
(7)
[unclassified]
(3)
2a
1u63A02
A:57-147
2b
1u63C02
C:57-147
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Pfam Domains
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Asym.Unit (117 KB)
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