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1U2Z
Biol. Unit 1
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Asym.Unit (206 KB)
Biol.Unit 1 (69 KB)
Biol.Unit 2 (70 KB)
Biol.Unit 3 (70 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HISTONE K79 METHYLTRANSFERASE DOT1P FROM YEAST
Authors
:
K. Sawada, Z. Yang, J. R. Horton, R. E. Collins, X. Zhang, X. Cheng
Date
:
20 Jul 04 (Deposition) - 07 Sep 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Histone Methyltransferase, Nucleosome
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Sawada, Z. Yang, J. R. Horton, R. E. Collins, X. Zhang, X. Cheng
Structure Of The Conserved Core Of The Yeast Dot1P, A Nucleosomal Histone H3 Lysine 79 Methyltransferase
J. Biol. Chem. V. 279 43296 2004
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: S-ADENOSYL-L-HOMOCYSTEINE (SAHa)
1b: S-ADENOSYL-L-HOMOCYSTEINE (SAHb)
1c: S-ADENOSYL-L-HOMOCYSTEINE (SAHc)
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No.
Name
Count
Type
Full Name
1
SAH
1
Ligand/Ion
S-ADENOSYL-L-HOMOCYSTEINE
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:369 , TYR A:370 , GLY A:373 , LEU A:375 , ASP A:397 , GLY A:399 , CYS A:405 , GLU A:422 , ILE A:423 , MET A:424 , SER A:459 , PHE A:460 , ASN A:479 , HOH A:802 , HOH A:814 , HOH A:867 , HOH A:874 , HOH A:916 , GLU C:197
BINDING SITE FOR RESIDUE SAH A 801
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
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1: DOT1 (A:254-567)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DOT1
PS51569
Histone-lysine N-methyltransferase DOT1 (EC 2.1.1.43) domain profile.
DOT1_YEAST
254-568
1
A:254-567
-
-
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Exons
(0, 0)
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1u2za_ (A:)
1b: SCOP_d1u2zb_ (B:)
1c: SCOP_d1u2zc_ (C:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Superfamily
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Family
:
Catalytic, N-terminal domain of histone methyltransferase Dot1l
(17)
Protein domain
:
Catalytic, N-terminal domain of histone methyltransferase Dot1l
(2)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(1)
1a
d1u2za_
A:
1b
d1u2zb_
B:
1c
d1u2zc_
C:
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CATH Domains
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Pfam Domains
(1, 3)
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all PFAM domains
1a: PFAM_DOT1_1u2zC01 (C:350-555)
1b: PFAM_DOT1_1u2zC02 (C:350-555)
1c: PFAM_DOT1_1u2zC03 (C:350-555)
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Clan
:
NADP_Rossmann
(1239)
Family
:
DOT1
(4)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(1)
1a
DOT1-1u2zC01
C:350-555
1b
DOT1-1u2zC02
C:350-555
1c
DOT1-1u2zC03
C:350-555
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Asym.Unit (206 KB)
Header - Asym.Unit
Biol.Unit 1 (69 KB)
Header - Biol.Unit 1
Biol.Unit 2 (70 KB)
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Biol.Unit 3 (70 KB)
Header - Biol.Unit 3
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