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1TH1
Biol. Unit 2
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Asym.Unit (182 KB)
Biol.Unit 1 (90 KB)
Biol.Unit 2 (90 KB)
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(1)
Title
:
BETA-CATENIN IN COMPLEX WITH A PHOSPHORYLATED APC 20AA REPEAT FRAGMENT
Authors
:
Y. Xing, W. K. Clements, I. Le Trong, T. R. Hinds, R. Stenkamp, D. Kimelman, W. Xu
Date
:
31 May 04 (Deposition) - 07 Sep 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Protein-Protein Complex, Cell Adhesion/Antitumor Protein Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Xing, W. K. Clements, I. Le Trong, T. R. Hinds, R. Stenkamp, D. Kimelman, W. Xu
Crystal Structure Of A Beta-Catenin/Apc Complex Reveals A Critical Role For Apc Phosphorylation In Apc Function.
Mol. Cell V. 15 523 2004
(for further references see the
PDB file header
)
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: PHOSPHOSERINE (SEPa)
1b: PHOSPHOSERINE (SEPb)
1c: PHOSPHOSERINE (SEPc)
1d: PHOSPHOSERINE (SEPd)
1e: PHOSPHOSERINE (SEPe)
1f: PHOSPHOSERINE (SEPf)
1g: PHOSPHOSERINE (SEPg)
1h: PHOSPHOSERINE (SEPh)
2a: PHOSPHOTHREONINE (TPOa)
2b: PHOSPHOTHREONINE (TPOb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SEP
4
Mod. Amino Acid
PHOSPHOSERINE
2
TPO
1
Mod. Amino Acid
PHOSPHOTHREONINE
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_072282 (L388P, chain B, )
2: VAR_017654 (V1472I, chain D, )
3: VAR_017655 (S1495G, chain D, )
4: VAR_020141 (T1496S, chain D, )
5: VAR_012976 (A1508V, chain D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_072282
L
388
P
CTNB1_HUMAN
Disease (MRD19)
---
B
L
388
P
2
UniProt
VAR_017654
V
1472
I
APC_HUMAN
Disease (MDB)
---
D
V
1472
I
3
UniProt
VAR_017655
S
1495
G
APC_HUMAN
Disease (MDB)
---
D
S
1495
G
4
UniProt
VAR_020141
T
1496
S
APC_HUMAN
Polymorphism
2229996
D
T
1496
S
5
UniProt
VAR_012976
A
1508
V
APC_HUMAN
Unclassified
---
D
A
1508
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 9)
Info
All PROSITE Patterns/Profiles
1: ARM_REPEAT (B:594-636)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ARM_REPEAT
PS50176
Armadillo/plakoglobin ARM repeat profile.
CTNB1_HUMAN
193-236
151-191
235-277
277-319
319-362
400-442
442-484
489-532
594-636
9
-
B:193-236
-
B:151-191
-
B:235-277
-
B:277-319
-
B:319-362
-
B:400-442
-
B:442-484
-
B:489-532
-
B:594-636
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1th1a_ (A:)
1b: SCOP_d1th1b_ (B:)
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)
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
ARM repeat
(317)
Family
:
Armadillo repeat
(77)
Protein domain
:
beta-Catenin
(21)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d1th1a_
A:
1b
d1th1b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1th1B00 (B:146-664)
1b: CATH_1th1A00 (A:145-664)
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)
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Homologous Superfamilies
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)
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)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Leucine-rich Repeat Variant
(77)
Homologous Superfamily
:
Leucine-rich Repeat Variant
(75)
Human (Homo sapiens)
(30)
1a
1th1B00
B:146-664
1b
1th1A00
A:145-664
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Pfam Domains
(2, 9)
Info
all PFAM domains
1a: PFAM_Arm_1th1B01 (B:583-623)
1b: PFAM_Arm_1th1B02 (B:583-623)
1c: PFAM_Arm_1th1B03 (B:583-623)
1d: PFAM_Arm_1th1B04 (B:583-623)
1e: PFAM_Arm_1th1B05 (B:583-623)
1f: PFAM_Arm_1th1B06 (B:583-623)
1g: PFAM_Arm_1th1B07 (B:583-623)
1h: PFAM_Arm_1th1B08 (B:583-623)
2a: PFAM_APC_crr_1th1C01 (C:1485-1510)
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Clans
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)
(
)
Organisms
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)
(
)
Clan
:
TPR
(230)
Family
:
Arm
(24)
Homo sapiens (Human)
(19)
1a
Arm-1th1B01
B:583-623
1b
Arm-1th1B02
B:583-623
1c
Arm-1th1B03
B:583-623
1d
Arm-1th1B04
B:583-623
1e
Arm-1th1B05
B:583-623
1f
Arm-1th1B06
B:583-623
1g
Arm-1th1B07
B:583-623
1h
Arm-1th1B08
B:583-623
Clan
:
no clan defined [family: APC_crr]
(3)
Family
:
APC_crr
(3)
Homo sapiens (Human)
(3)
2a
APC_crr-1th1C01
C:1485-1510
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Asymmetric Unit 1
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Asym.Unit (182 KB)
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