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1TBP
Asym. Unit
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Asym.Unit (62 KB)
Biol.Unit 1 (59 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF YEAST TATA-BINDING PROTEIN AND MODEL FOR INTERACTION WITH DNA
Authors
:
D. I. Chasman, K. M. Flaherty, P. A. Sharp, R. D. Kornberg
Date
:
02 Aug 93 (Deposition) - 31 Jan 94 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. I. Chasman, K. M. Flaherty, P. A. Sharp, R. D. Kornberg
Crystal Structure Of Yeast Tata-Binding Protein And Model For Interaction With Dna.
Proc. Natl. Acad. Sci. Usa V. 90 8174 1993
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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PROSITE Patterns/Profiles
(1, 4)
Info
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1: TFIID (A:94-143,B:94-143|A:185-234,B:185-...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TFIID
PS00351
Transcription factor TFIID repeat signature.
TBP_YEAST
94-143
185-234
4
A:94-143
B:94-143
A:185-234
B:185-234
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Exons
(1, 2)
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Exon 1.1 (A:61-240 | B:61-240)
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1: Boundary -/1.1
2: Boundary 1.1/-
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ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YER148W
1
YER148W.1
V:465298-466020
723
TBP_YEAST
1-240
240
2
A:61-240
B:61-240
180
180
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1tbpa1 (A:61-155)
1b: SCOP_d1tbpa2 (A:156-240)
1c: SCOP_d1tbpb1 (B:61-155)
1d: SCOP_d1tbpb2 (B:156-240)
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Protein Domains
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
TBP-like
(289)
Superfamily
:
TATA-box binding protein-like
(70)
Family
:
TATA-box binding protein (TBP), C-terminal domain
(29)
Protein domain
:
TATA-box binding protein (TBP), C-terminal domain
(29)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(7)
1a
d1tbpa1
A:61-155
1b
d1tbpa2
A:156-240
1c
d1tbpb1
B:61-155
1d
d1tbpb2
B:156-240
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1tbpA01 (A:61-71,A:158-240)
1b: CATH_1tbpB01 (B:61-71,B:158-240)
1c: CATH_1tbpA02 (A:72-157)
1d: CATH_1tbpB02 (B:72-157)
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Organisms
(
)
(
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
TATA-Binding Protein
(118)
Homologous Superfamily
:
TATA-Binding Protein
(37)
Baker's yeast (Saccharomyces cerevisiae)
(1)
1a
1tbpA01
A:61-71,A:158-240
1b
1tbpB01
B:61-71,B:158-240
1c
1tbpA02
A:72-157
1d
1tbpB02
B:72-157
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_TBP_1tbpB01 (B:152-238)
1b: PFAM_TBP_1tbpB02 (B:152-238)
1c: PFAM_TBP_1tbpB03 (B:152-238)
1d: PFAM_TBP_1tbpB04 (B:152-238)
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Clan
:
TBP-like
(48)
Family
:
TBP
(22)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(6)
1a
TBP-1tbpB01
B:152-238
1b
TBP-1tbpB02
B:152-238
1c
TBP-1tbpB03
B:152-238
1d
TBP-1tbpB04
B:152-238
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Asym.Unit (62 KB)
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