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Class: Alpha and beta proteins (a+b) (23004)
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Fold: TBP-like (289)
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Superfamily: TATA-box binding protein-like (70)
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Family: automated matches (6)
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Protein domain: automated matches (6)
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Fungus (Encephalitozoon cuniculi) [TaxId: 6035] (3)
3EIKA:20-113; A:114-197; B:20-113; B:114-198DOUBLE STRANDED DNA BINDING PROTEIN
3OC3C:19-113; D:19-113; D:114-196; C:114-196CRYSTAL STRUCTURE OF THE MOT1 N-TERMINAL DOMAIN IN COMPLEX WITH TBP
3OCIA:19-113; A:114-197; B:19-113; B:114-198CRYSTAL STRUCTURE OF TBP (TATA BOX BINDING PROTEIN)
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Human (Homo sapiens) [TaxId: 9606] (1)
2XHIA:10-135SEPARATION-OF-FUNCTION MUTANTS UNRAVEL THE DUAL REACTION MODE OF HUMAN 8-OXOGUANINE DNA GLYCOSYLASE
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Thale cress (Arabidopsis thaliana) [TaxId: 3702] (2)
1VTLE:13-106; E:107-198; F:13-106; F:107-198CO-CRYSTAL STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF A TATA ELEMENT
1VTOA:12-106; A:107-198; B:1011-1106; B:1107-11981.9 A RESOLUTION REFINED STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF TATAAAAG
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Family: DNA repair glycosylase, N-terminal domain (35)
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Protein domain: 3-Methyladenine DNA glycosylase II (gene alkA or aidA) (11)
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Escherichia coli [TaxId: 562] (11)
1DIZA:1-99; B:1-99CRYSTAL STRUCTURE OF E. COLI 3-METHYLADENINE DNA GLYCOSYLASE (ALKA) COMPLEXED WITH DNA
1MPGA:1-99; B:1-993-METHYLADENINE DNA GLYCOSYLASE II FROM ESCHERICHIA COLI
1PVSA:1-99; B:1-993-METHYLADENINE GLCOSYLASE II(ALKA) HYPOXANTHINE COMPLEX
3CVSA:1-99; B:1-99; C:1-99; D:1-99CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:ADENINE BASE PAIR
3CVTA:1-99; B:1-99; C:1-99; D:1-99CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR
3CW7A:1-99; B:1-99; C:1-99; D:1-99CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR
3CWAA:1-99; B:1-99; C:1-99; D:1-99CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 8OXOGUANINE:CYTOSINE BASE PAIR
3CWSA:1-99; B:1-99; C:1-99; D:1-99CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'-DEOXYINOSINE:THYMINE BASE PAIR
3CWTA:1-99; B:1-99; C:1-99; D:1-99CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'-DEOXYINOSINE:ADENINE BASE PAIR
3CWUA:1-99; B:1-99; C:1-99; D:1-99CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'-DEOXY-1,N6-ETHENOADENINE:THYMINE BASE PAIR
3D4VA:1-99; B:1-99; C:1-99; D:1-99CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX N7METHYLGUANINE:CYTOSINE BASE PAIR
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Protein domain: 8-oxoguanine glycosylase (24)
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Human (Homo sapiens) [TaxId: 9606] (24)
1EBMA:9-135CRYSTAL STRUCTURE OF THE HUMAN 8-OXOGUANINE GLYCOSYLASE (HOGG1) BOUND TO A SUBSTRATE OLIGONUCLEOTIDE
1FN7A:9-135COUPLING OF DAMAGE RECOGNITION AND CATALYSIS BY A HUMAN BASE-EXCISION DNA REPAIR PROTEIN
1HU0A:9-135CRYSTAL STRUCTURE OF AN HOGG1-DNA BOROHYDRIDE TRAPPED INTERMEDIATE COMPLEX
1KO9A:12-135NATIVE STRUCTURE OF THE HUMAN 8-OXOGUANINE DNA GLYCOSYLASE HOGG1
1LWVA:9-135BOROHYDRIDE-TRAPPED HOGG1 INTERMEDIATE STRUCTURE CO-CRYSTALLIZED WITH 8-AMINOGUANINE
1LWWA:9-135BOROHYDRIDE-TRAPPED HOGG1 INTERMEDIATE STRUCTURE CO-CRYSTALLIZED WITH 8-BROMOGUANINE
1LWYA:9-135HOGG1 BOROHYDRIDE-TRAPPED INTERMEDIATE WITHOUT 8-OXOGUANINE
1M3HA:9-135CRYSTAL STRUCTURE OF HOGG1 D268E MUTANT WITH PRODUCT OLIGONUCLEOTIDE
1M3QA:9-135CRYSTAL STRUCTURE OF HOGG1 D268E MUTANT WITH BASE-EXCISED DNA AND 8-AMINOGUANINE
1N39A:9-135STRUCTURAL AND BIOCHEMICAL EXPLORATION OF A CRITICAL AMINO ACID IN HUMAN 8-OXOGUANINE GLYCOSYLASE
1N3AA:9-135STRUCTURAL AND BIOCHEMICAL EXPLORATION OF A CRITICAL AMINO ACID IN HUMAN 8-OXOGUANINE GLYCOSYLASE
1N3CA:9-135STRUCTURAL AND BIOCHEMICAL EXPLORATION OF A CRITICAL AMINO ACID IN HUMAN 8-OXOGUANINE GLYCOSYLASE
1YQKA:12-135HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED WITH GUANINE CONTAINING DNA
1YQLA:9-135CATALYTICALLY INACTIVE HOGG1 CROSSLINKED WITH 7-DEAZA-8-AZAGUANINE CONTAINING DNA
1YQMA:9-135CATALYTICALLY INACTIVE HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED TO 7-DEAZAGUANINE CONTAINING DNA
1YQRA:9-135CATALYTICALLY INACTIVE HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED TO OXOG CONTAINING DNA
2I5WA:12-135STRUCTURE OF HOGG1 CROSSLINKED TO DNA SAMPLING A NORMAL G ADJACENT TO AN OXOG
2NOBA:9-135STRUCTURE OF CATALYTICALLY INACTIVE H270A HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED TO 8-OXOGUANINE DNA
2NOEA:9-135STRUCTURE OF CATALYTICALLY INACTIVE G42A HUMAN 8-OXOGUANINE GLYCOSYLASE COMPLEXED TO 8-OXOGUANINE DNA
2NOFA:9-135STRUCTURE OF Q315F HUMAN 8-OXOGUANINE GLYCOSYLASE PROXIMAL CROSSLINK TO 8-OXOGUANINE DNA
2NOHA:10-135STRUCTURE OF CATALYTICALLY INACTIVE Q315A HUMAN 8-OXOGUANINE GLYCOSYLASE COMPLEXED TO 8-OXOGUANINE DNA
2NOIA:8-135STRUCTURE OF G42A HUMAN 8-OXOGUANINE GLYCOSYLASE CROSSLINKED TO UNDAMAGED G-CONTAINING DNA
2NOLA:9-135STRUCTURE OF CATALYTICALLY INACTIVE HUMAN 8-OXOGUANINE GLYCOSYLASE DISTAL CROSSLINK TO OXOG DNA
2NOZA:9-135STRUCTURE OF Q315F HUMAN 8-OXOGUANINE GLYCOSYLASE DISTAL CROSSLINK TO 8-OXOGUANINE DNA
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Family: TATA-box binding protein (TBP), C-terminal domain (29)
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Protein domain: TATA-box binding protein (TBP), C-terminal domain (29)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (7)
1NGMA:61-155; A:156-240; E:61-155; E:156-240; I:61-155; I:156-240; M:61-155; M:156-240CRYSTAL STRUCTURE OF A YEAST BRF1-TBP-DNA TERNARY COMPLEX
1NH2A:61-155; A:156-240CRYSTAL STRUCTURE OF A YEAST TFIIA/TBP/DNA COMPLEX
1RM1A:61-148; A:149-240STRUCTURE OF A YEAST TFIIA/TBP/TATA-BOX DNA COMPLEX
1TBAB:61-155; B:156-240SOLUTION STRUCTURE OF A TBP-TAFII230 COMPLEX: PROTEIN MIMICRY OF THE MINOR GROOVE SURFACE OF THE TATA BOX UNWOUND BY TBP, NMR, 25 STRUCTURES
1TBPA:61-155; A:156-240; B:61-155; B:156-240CRYSTAL STRUCTURE OF YEAST TATA-BINDING PROTEIN AND MODEL FOR INTERACTION WITH DNA
1YTBA:61-155; A:156-240; B:61-155; B:156-240CRYSTAL STRUCTURE OF A YEAST TBP/TATA-BOX COMPLEX
1YTFA:61-155; A:156-240YEAST TFIIA/TBP/DNA COMPLEX
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Human (Homo sapiens) [TaxId: 9606] (5)
1C9BB:158-252; J:158-252; J:253-337; N:158-252; N:253-337; R:158-252; R:253-337; B:253-337; F:158-252; F:253-337CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP)
1CDWA:155-252; A:253-333HUMAN TBP CORE DOMAIN COMPLEXED WITH DNA
1JFIC:356-456; C:457-538CRYSTAL STRUCTURE OF THE NC2-TBP-DNA TERNARY COMPLEX
1NVPA:159-252; A:253-338HUMAN TFIIA/TBP/DNA COMPLEX
1TGHA:155-252; A:253-334TATA BINDING PROTEIN (TBP)/DNA COMPLEX
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Pyrococcus woesei [TaxId: 2262] (3)
1AISA:1-92; A:93-181TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
1D3UA:1-92; A:93-181TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI
1PCZA:2-92; A:93-184; B:2-92; B:93-184STRUCTURE OF TATA-BINDING PROTEIN
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Sulfolobus acidocaldarius [TaxId: 2285] (1)
1MP9A:5-96; A:97-197; B:3-96; B:97-191TBP FROM A MESOTHERMOPHILIC ARCHAEON, SULFOLOBUS ACIDOCALDARIUS
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Thale cress (Arabidopsis thaliana) [TaxId: 3702] (13)
1QN3A:16-115; A:116-198; B:12-115; B:116-198CRYSTAL STRUCTURE OF THE C(-25) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QN4A:16-115; B:12-115; B:116-198; A:116-198CRYSTAL STRUCTURE OF THE T(-24) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QN5A:16-115; A:116-198; B:12-115; B:116-197CRYSTAL STRUCTURE OF THE G(-26) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QN6A:15-115; A:116-198; B:12-115; B:116-198CRYSTAL STRUCTURE OF THE T(-26) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QN7A:13-115; A:116-198; B:12-115; B:116-197CRYSTAL STRUCTURE OF THE T(-27) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QN8A:16-115; A:116-198; B:12-115; B:116-198CRYSTAL STRUCTURE OF THE T(-28) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QN9A:16-115; A:116-198; B:12-115; B:116-197CRYSTAL STRUCTURE OF THE C(-29) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QNAA:17-115; A:116-198; B:12-115; B:116-197CRYSTAL STRUCTURE OF THE T(-30) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QNBA:16-115; A:116-198; B:12-115; B:116-198CRYSTAL STRUCTURE OF THE T(-25) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QNCA:16-115; A:116-198; B:12-115; B:116-198CRYSTAL STRUCTURE OF THE A(-31) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
1QNEA:12-115; A:116-198; B:11-115; B:116-198CRYSTAL STRUCTURE OF THE ADENOVIRUS MAJOR LATE PROMOTER TATA BOX BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2).
1VOKA:7-115; A:116-198; B:12-115; B:116-199ARABIDOPSIS THALIANA TBP (DIMER)
1VOLB:12-115; B:116-198TFIIB (HUMAN CORE DOMAIN)/TBP (A.THALIANA)/TATA ELEMENT TERNARY COMPLEX