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1SYR
Biol. Unit 3
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Asym.Unit (203 KB)
Biol.Unit 1 (36 KB)
Biol.Unit 2 (36 KB)
Biol.Unit 3 (35 KB)
Biol.Unit 4 (35 KB)
Biol.Unit 5 (35 KB)
Biol.Unit 6 (35 KB)
Biol.Unit 7 (35 KB)
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(1)
Title
:
INITIAL STRUCTURAL ANALYSIS OF PLASMODIUM FALCIPARUM THIOREDOXIN
Authors
:
M. A. Robien, W. G. J. Hol, Structural Genomics Of Pathogenic Proto Consortium (Sgpp)
Date
:
01 Apr 04 (Deposition) - 13 Apr 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.95
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Biol. Unit 5: I,J (1x)
Biol. Unit 6: K (2x)
Biol. Unit 7: L (2x)
Keywords
:
Sgpp, Structural Genomics, Psi, Protein Structure Initiative, Structural Genomics Of Pathogenic Protozoa Consortium, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. A. Robien, W. G. J. Hol, Structural Genomics Of Pathogenic Protozoa
Initial Structural Analysis Of Plasmodium Falciparum Thioredoxin
To Be Published
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
2: THIOREDOXIN_1 (E:30-48,F:30-48)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
THIOREDOXIN_2
PS51352
Thioredoxin domain profile.
THIO_PLAF7
1-104
0
-
-
-
2
THIOREDOXIN_1
PS00194
Thioredoxin family active site.
THIO_PLAF7
22-40
2
-
-
-
-
E:30-48
F:30-48
-
-
-
-
-
-
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d1syra_ (A:)
1b: SCOP_d1syrb_ (B:)
1c: SCOP_d1syrk_ (K:)
1d: SCOP_d1syrl_ (L:)
1e: SCOP_d1syrc_ (C:)
1f: SCOP_d1syrd_ (D:)
1g: SCOP_d1syre_ (E:)
1h: SCOP_d1syrf_ (F:)
1i: SCOP_d1syrg_ (G:)
1j: SCOP_d1syrh_ (H:)
1k: SCOP_d1syri_ (I:)
1l: SCOP_d1syrj_ (J:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Thioltransferase
(167)
Protein domain
:
Thioredoxin
(106)
Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
(1)
1a
d1syra_
A:
1b
d1syrb_
B:
1c
d1syrk_
K:
1d
d1syrl_
L:
1e
d1syrc_
C:
1f
d1syrd_
D:
1g
d1syre_
E:
1h
d1syrf_
F:
1i
d1syrg_
G:
1j
d1syrh_
H:
1k
d1syri_
I:
1l
d1syrj_
J:
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CATH Domains
(1, 12)
Info
all CATH domains
1a: CATH_1syrA00 (A:9-111)
1b: CATH_1syrC00 (C:9-111)
1c: CATH_1syrL00 (L:10-111)
1d: CATH_1syrH00 (H:9-111)
1e: CATH_1syrB00 (B:10-111)
1f: CATH_1syrD00 (D:10-111)
1g: CATH_1syrE00 (E:10-111)
1h: CATH_1syrF00 (F:10-111)
1i: CATH_1syrG00 (G:10-111)
1j: CATH_1syrI00 (I:10-111)
1k: CATH_1syrJ00 (J:10-111)
1l: CATH_1syrK00 (K:10-111)
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Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Plasmodium falciparum 3d7. Organism_taxid: 36329. Strain: 3d7.
(1)
1a
1syrA00
A:9-111
1b
1syrC00
C:9-111
1c
1syrL00
L:10-111
1d
1syrH00
H:9-111
1e
1syrB00
B:10-111
1f
1syrD00
D:10-111
1g
1syrE00
E:10-111
1h
1syrF00
F:10-111
1i
1syrG00
G:10-111
1j
1syrI00
I:10-111
1k
1syrJ00
J:10-111
1l
1syrK00
K:10-111
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Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_Thioredoxin_1syrL01 (L:10-110)
1b: PFAM_Thioredoxin_1syrL02 (L:10-110)
1c: PFAM_Thioredoxin_1syrL03 (L:10-110)
1d: PFAM_Thioredoxin_1syrL04 (L:10-110)
1e: PFAM_Thioredoxin_1syrL05 (L:10-110)
1f: PFAM_Thioredoxin_1syrL06 (L:10-110)
1g: PFAM_Thioredoxin_1syrL07 (L:10-110)
1h: PFAM_Thioredoxin_1syrL08 (L:10-110)
1i: PFAM_Thioredoxin_1syrL09 (L:10-110)
1j: PFAM_Thioredoxin_1syrL10 (L:10-110)
1k: PFAM_Thioredoxin_1syrL11 (L:10-110)
1l: PFAM_Thioredoxin_1syrL12 (L:10-110)
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Clan
:
Thioredoxin
(367)
Family
:
Thioredoxin
(82)
Plasmodium falciparum (isolate 3D7)
(1)
1a
Thioredoxin-1syrL01
L:10-110
1b
Thioredoxin-1syrL02
L:10-110
1c
Thioredoxin-1syrL03
L:10-110
1d
Thioredoxin-1syrL04
L:10-110
1e
Thioredoxin-1syrL05
L:10-110
1f
Thioredoxin-1syrL06
L:10-110
1g
Thioredoxin-1syrL07
L:10-110
1h
Thioredoxin-1syrL08
L:10-110
1i
Thioredoxin-1syrL09
L:10-110
1j
Thioredoxin-1syrL10
L:10-110
1k
Thioredoxin-1syrL11
L:10-110
1l
Thioredoxin-1syrL12
L:10-110
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Asym.Unit (203 KB)
Header - Asym.Unit
Biol.Unit 1 (36 KB)
Header - Biol.Unit 1
Biol.Unit 2 (36 KB)
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Biol.Unit 3 (35 KB)
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Biol.Unit 4 (35 KB)
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Biol.Unit 5 (35 KB)
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