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1SJJ
Asym. Unit
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Asym.Unit (250 KB)
Biol.Unit 1 (242 KB)
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(1)
Title
:
CRYO-EM STRUCTURE OF CHICKEN GIZZARD SMOOTH MUSCLE ALPHA-ACTININ
Authors
:
J. Liu, D. W. Taylor, K. A. Taylor
Date
:
03 Mar 04 (Deposition) - 23 Mar 04 (Release) - 24 Feb 09 (Revision)
Method
:
ELECTRON CRYSTALLOGRAPHY
Resolution
:
20.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
3-Helix Bundle, Calponin Homology Domain, Calmodulin-Like Domain, Actin Binding Protein, Contractile Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Liu, D. W. Taylor, K. A. Taylor
A 3-D Reconstruction Of Smooth Muscle Alpha-Actinin By Cryoem Reveals Two Different Conformations At The Actin-Binding Region.
J. Mol. Biol. V. 338 115 2004
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(5, 14)
Info
All PROSITE Patterns/Profiles
1: CH (A:32-136,B:32-136|A:145-248,B:145-...)
2: ACTININ_1 (A:34-43,B:34-43)
3: ACTININ_2 (A:108-132,B:108-132)
4: EF_HAND_2 (A:747-781,B:747-781|A:785-818,B:78...)
5: EF_HAND_1 (A:760-772,B:760-772)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CH
PS50021
Calponin homology domain profile.
ACTN1_CHICK
32-136
145-248
4
A:32-136
B:32-136
A:145-248
B:145-248
2
ACTININ_1
PS00019
Actinin-type actin-binding domain signature 1.
ACTN1_CHICK
34-43
2
A:34-43
B:34-43
3
ACTININ_2
PS00020
Actinin-type actin-binding domain signature 2.
ACTN1_CHICK
108-132
2
A:108-132
B:108-132
4
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
ACTN1_CHICK
747-782
788-823
4
A:747-781
B:747-781
A:785-818
B:785-818
5
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
ACTN1_CHICK
760-772
2
A:760-772
B:760-772
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1sjja_ (A:)
1b: SCOP_d1sjjb_ (B:)
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Class
:
Low resolution protein structures
(283)
Fold
:
Muscle protein complexes
(13)
Superfamily
:
Muscle protein complexes
(13)
Family
:
Muscle protein complexes
(13)
Protein domain
:
Actinin
(1)
Chicken (Gallus gallus) [TaxId: 9031]
(1)
1a
d1sjja_
A:
1b
d1sjjb_
B:
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CATH Domains
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Pfam Domains
(4, 16)
Info
all PFAM domains
1a: PFAM_CH_1sjjB01 (B:148-251)
1b: PFAM_CH_1sjjB02 (B:148-251)
1c: PFAM_CH_1sjjB03 (B:148-251)
1d: PFAM_CH_1sjjB04 (B:148-251)
2a: PFAM_EF_hand_4_1sjjB05 (B:751-780)
2b: PFAM_EF_hand_4_1sjjB06 (B:751-780)
3a: PFAM_efhand_Ca_insen_1sjjB07 (B:818-883)
3b: PFAM_efhand_Ca_insen_1sjjB08 (B:818-883)
4a: PFAM_Spectrin_1sjjB09 (B:631-734)
4b: PFAM_Spectrin_1sjjB10 (B:631-734)
4c: PFAM_Spectrin_1sjjB11 (B:631-734)
4d: PFAM_Spectrin_1sjjB12 (B:631-734)
4e: PFAM_Spectrin_1sjjB13 (B:631-734)
4f: PFAM_Spectrin_1sjjB14 (B:631-734)
4g: PFAM_Spectrin_1sjjB15 (B:631-734)
4h: PFAM_Spectrin_1sjjB16 (B:631-734)
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Clans
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Organisms
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(
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Clan
:
CH
(43)
Family
:
CH
(43)
Gallus gallus (Chicken)
(1)
1a
CH-1sjjB01
B:148-251
1b
CH-1sjjB02
B:148-251
1c
CH-1sjjB03
B:148-251
1d
CH-1sjjB04
B:148-251
Clan
:
EF_hand
(270)
Family
:
EF_hand_4
(30)
Gallus gallus (Chicken)
(14)
2a
EF_hand_4-1sjjB05
B:751-780
2b
EF_hand_4-1sjjB06
B:751-780
Family
:
efhand_Ca_insen
(1)
Gallus gallus (Chicken)
(1)
3a
efhand_Ca_insen-1sjjB07
B:818-883
3b
efhand_Ca_insen-1sjjB08
B:818-883
Clan
:
no clan defined [family: Spectrin]
(10)
Family
:
Spectrin
(10)
Gallus gallus (Chicken)
(1)
4a
Spectrin-1sjjB09
B:631-734
4b
Spectrin-1sjjB10
B:631-734
4c
Spectrin-1sjjB11
B:631-734
4d
Spectrin-1sjjB12
B:631-734
4e
Spectrin-1sjjB13
B:631-734
4f
Spectrin-1sjjB14
B:631-734
4g
Spectrin-1sjjB15
B:631-734
4h
Spectrin-1sjjB16
B:631-734
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