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1SHZ
Biol. Unit 2
Info
Asym.Unit (182 KB)
Biol.Unit 1 (91 KB)
Biol.Unit 2 (89 KB)
Biol.Unit 3 (175 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE P115RHOGEF RGRGS DOMAIN IN A COMPLEX WITH GALPHA(13):GALPHA(I1) CHIMERA
Authors
:
Z. Chen, W. D. Singer, P. C. Sternweis, S. R. Sprang
Date
:
26 Feb 04 (Deposition) - 18 Jan 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.85
Chains
:
Asym. Unit : A,C,D,F
Biol. Unit 1: A,C (1x)
Biol. Unit 2: D,F (1x)
Biol. Unit 3: A,C,D,F (1x)
Keywords
:
Signal Transduction, Protein Complex, Signaling Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
Z. Chen, W. D. Singer, P. C. Sternweis, S. R. Sprang
Structure Of The P115Rhogef Rgrgs Domain-Galpha13/I1 Chimera Complex Suggests Convergent Evolution Of A Gtpase Activator.
Nat. Struct. Mol. Biol. V. 12 191 2005
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: TETRAFLUOROALUMINATE ION (ALFa)
1b: TETRAFLUOROALUMINATE ION (ALFb)
2a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
2b: GUANOSINE-5'-DIPHOSPHATE (GDPb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ALF
1
Ligand/Ion
TETRAFLUOROALUMINATE ION
2
GDP
1
Ligand/Ion
GUANOSINE-5'-DIPHOSPHATE
3
MG
-1
Ligand/Ion
MAGNESIUM ION
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Sites
(3, 3)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
SER D:62 , THR D:203 , ALF D:378 , GDP D:476 , HOH D:502
BINDING SITE FOR RESIDUE MG D 377
2
AC4
SOFTWARE
GLY D:57 , GLU D:58 , LYS D:61 , ARG D:200 , PRO D:202 , THR D:203 , GLY D:225 , GLN D:226 , MG D:377 , GDP D:476 , HOH D:502 , HOH D:550
BINDING SITE FOR RESIDUE ALF D 378
3
AC6
SOFTWARE
GLU D:58 , SER D:59 , GLY D:60 , LYS D:61 , SER D:62 , THR D:63 , SER D:173 , LEU D:197 , LEU D:198 , ARG D:200 , ASN D:291 , LYS D:292 , ASP D:294 , CYS D:347 , ALA D:348 , THR D:349 , MG D:377 , ALF D:378
BINDING SITE FOR RESIDUE GDP D 476
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_ARHG1_HUMAN_CCDS12590_1_01 (V165M, chain F, )
2: VAR_035969 (M165V, chain F, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
CancerSNP
VAR_ARHG1_HUMAN_CCDS12590_1_01
*
M
165
M
ARHG1_HUMAN
Disease (Colorectal cancer)
---
F
V
165
M
2
UniProt
VAR_035969
M
165
V
ARHG1_HUMAN
Unclassified
---
F
M
165
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 6)
Info
All SCOP Domains
1a: SCOP_d1shzc_ (C:)
1b: SCOP_d1shzf_ (F:)
2a: SCOP_d1shza1 (A:76-200)
2b: SCOP_d1shzd1 (D:76-200)
3a: SCOP_d1shza2 (A:46-75,A:201-371)
3b: SCOP_d1shzd2 (D:46-75,D:201-371)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Regulator of G-protein signaling, RGS
(52)
Superfamily
:
Regulator of G-protein signaling, RGS
(52)
Family
:
automated matches
(25)
Protein domain
:
automated matches
(25)
Human (Homo sapiens) [TaxId: 9606]
(24)
1a
d1shzc_
C:
1b
d1shzf_
F:
Fold
:
Transducin (alpha subunit), insertion domain
(49)
Superfamily
:
Transducin (alpha subunit), insertion domain
(49)
Family
:
Transducin (alpha subunit), insertion domain
(49)
Protein domain
:
Transducin (alpha subunit), insertion domain
(49)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(19)
2a
d1shza1
A:76-200
2b
d1shzd1
D:76-200
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
Transducin (alpha subunit)
(51)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(21)
3a
d1shza2
A:46-75,A:201-371
3b
d1shzd2
D:46-75,D:201-371
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1shzD01 (D:45-76,D:203-371)
1b: CATH_1shzA01 (A:46-76,A:203-371)
2a: CATH_1shzA02 (A:77-202)
2b: CATH_1shzD02 (D:77-202)
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)
Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
House mouse, norway rat (Mus musculus, rattus norvegicus)
(1)
1a
1shzD01
D:45-76,D:203-371
1b
1shzA01
A:46-76,A:203-371
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
GI Alpha 1, domain 2-like
(67)
Homologous Superfamily
:
GI Alpha 1, domain 2-like
(66)
House mouse, norway rat (Mus musculus, rattus norvegicus)
(1)
2a
1shzA02
A:77-202
2b
1shzD02
D:77-202
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_G_alpha_1shzD01 (D:49-299)
1b: PFAM_G_alpha_1shzD02 (D:49-299)
2a: PFAM_RGS_like_1shzF01 (F:44-232)
2b: PFAM_RGS_like_1shzF02 (F:44-232)
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)
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)
Clan
:
P-loop_NTPase
(1112)
Family
:
G-alpha
(24)
Mus musculus (Mouse)
(5)
1a
G-alpha-1shzD01
D:49-299
1b
G-alpha-1shzD02
D:49-299
Clan
:
RGS
(17)
Family
:
RGS-like
(1)
Homo sapiens (Human)
(1)
2a
RGS-like-1shzF01
F:44-232
2b
RGS-like-1shzF02
F:44-232
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Asymmetric Unit 1
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Asym.Unit (182 KB)
Header - Asym.Unit
Biol.Unit 1 (91 KB)
Header - Biol.Unit 1
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Header - Biol.Unit 3
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