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1S1C
Asym. Unit
Info
Asym.Unit (88 KB)
Biol.Unit 1 (83 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE HUMAN RHOA AND RHO-BINDING DOMAIN OF HUMAN ROCKI
Authors
:
R. Dvorsky, L. Blumenstein, I. R. Vetter, M. R. Ahmadian
Date
:
06 Jan 04 (Deposition) - 10 Feb 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,X,Y
Biol. Unit 1: A,B,X,Y (1x)
Keywords
:
Coiled-Coil, Gtpase, Rho Kinase, Rock, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Dvorsky, L. Blumenstein, I. R. Vetter, M. R. Ahmadian
Structural Insights Into The Interaction Of Rocki With The Switch Regions Of Rhoa.
J. Biol. Chem. V. 279 7098 2004
(for further references see the
PDB file header
)
[
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPa)
1b: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPb)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GNP
2
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2
MG
2
Ligand/Ion
MAGNESIUM ION
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:19 , THR A:37 , GNP A:200 , HOH A:301 , HOH A:314
BINDING SITE FOR RESIDUE MG A 300
2
AC2
SOFTWARE
THR B:19 , THR B:37 , GNP B:1200 , HOH B:1301 , HOH B:1313
BINDING SITE FOR RESIDUE MG B 1300
3
AC3
SOFTWARE
GLY A:14 , ALA A:15 , CYS A:16 , GLY A:17 , LYS A:18 , THR A:19 , CYS A:20 , PHE A:30 , TYR A:34 , PRO A:36 , THR A:37 , GLY A:62 , LYS A:118 , ASP A:120 , LEU A:121 , SER A:160 , ALA A:161 , LYS A:162 , MG A:300 , HOH A:301 , HOH A:319 , HOH A:322
BINDING SITE FOR RESIDUE GNP A 200
4
AC4
SOFTWARE
GLY B:14 , ALA B:15 , CYS B:16 , GLY B:17 , LYS B:18 , THR B:19 , CYS B:20 , PHE B:30 , TYR B:34 , PRO B:36 , THR B:37 , GLY B:62 , LYS B:118 , ASP B:120 , LEU B:121 , SER B:160 , ALA B:161 , LYS B:162 , MG B:1300 , HOH B:1301 , HOH B:1303 , HOH B:1313 , HOH B:1319 , HOH B:1320
BINDING SITE FOR RESIDUE GNP B 1200
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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Exons
(3, 6)
Info
All Exons
Exon 1.24 (X:945-972 | Y:945-972)
Exon 1.25 (X:972-1001 | Y:972-1001)
Exon 1.26 (X:1002-1013 | Y:1002-1014)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.23/1.24
2: Boundary 1.24/1.25
3: Boundary 1.25/1.26
4: Boundary 1.26/1.27
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000399799
1
ENSE00001540250
chr18:
18691812-18690779
1034
ROCK1_HUMAN
1-31
31
0
-
-
1.2
ENST00000399799
2
ENSE00000666550
chr18:
18650574-18650493
82
ROCK1_HUMAN
32-59
28
0
-
-
1.3
ENST00000399799
3
ENSE00000666552
chr18:
18629841-18629741
101
ROCK1_HUMAN
59-92
34
0
-
-
1.4
ENST00000399799
4
ENSE00000666554
chr18:
18629190-18629053
138
ROCK1_HUMAN
93-138
46
0
-
-
1.5
ENST00000399799
5
ENSE00001106179
chr18:
18625428-18625253
176
ROCK1_HUMAN
139-197
59
0
-
-
1.6
ENST00000399799
6
ENSE00001106157
chr18:
18624147-18624063
85
ROCK1_HUMAN
197-225
29
0
-
-
1.7
ENST00000399799
7
ENSE00001106151
chr18:
18622670-18622526
145
ROCK1_HUMAN
226-274
49
0
-
-
1.8
ENST00000399799
8
ENSE00001106132
chr18:
18622196-18622058
139
ROCK1_HUMAN
274-320
47
0
-
-
1.9
ENST00000399799
9
ENSE00001106127
chr18:
18619524-18619433
92
ROCK1_HUMAN
320-351
32
0
-
-
1.10
ENST00000399799
10
ENSE00001205106
chr18:
18608896-18608737
160
ROCK1_HUMAN
351-404
54
0
-
-
1.11
ENST00000399799
11
ENSE00000666570
chr18:
18603641-18603581
61
ROCK1_HUMAN
404-424
21
0
-
-
1.12
ENST00000399799
12
ENSE00000666572
chr18:
18600200-18600112
89
ROCK1_HUMAN
425-454
30
0
-
-
1.13
ENST00000399799
13
ENSE00000666574
chr18:
18595440-18595392
49
ROCK1_HUMAN
454-470
17
0
-
-
1.14
ENST00000399799
14
ENSE00001106120
chr18:
18588155-18588020
136
ROCK1_HUMAN
471-516
46
0
-
-
1.15
ENST00000399799
15
ENSE00000666578
chr18:
18586751-18586660
92
ROCK1_HUMAN
516-546
31
0
-
-
1.16
ENST00000399799
16
ENSE00000666579
chr18:
18586558-18586312
247
ROCK1_HUMAN
547-629
83
0
-
-
1.17
ENST00000399799
17
ENSE00000948798
chr18:
18572898-18572792
107
ROCK1_HUMAN
629-664
36
0
-
-
1.18
ENST00000399799
18
ENSE00000948799
chr18:
18571287-18571137
151
ROCK1_HUMAN
665-715
51
0
-
-
1.19
ENST00000399799
19
ENSE00000666582
chr18:
18567071-18566911
161
ROCK1_HUMAN
715-768
54
0
-
-
1.20
ENST00000399799
20
ENSE00000666583
chr18:
18564496-18564312
185
ROCK1_HUMAN
769-830
62
0
-
-
1.21
ENST00000399799
21
ENSE00000666584
chr18:
18562793-18562724
70
ROCK1_HUMAN
830-853
24
0
-
-
1.22
ENST00000399799
22
ENSE00000666585
chr18:
18559965-18559871
95
ROCK1_HUMAN
854-885
32
0
-
-
1.23
ENST00000399799
23
ENSE00001106143
chr18:
18550474-18550309
166
ROCK1_HUMAN
885-940
56
0
-
-
1.24
ENST00000399799
24
ENSE00000948802
chr18:
18549169-18549076
94
ROCK1_HUMAN
941-972
32
2
X:945-972
Y:945-972
28
28
1.25
ENST00000399799
25
ENSE00000948803
chr18:
18548821-18548733
89
ROCK1_HUMAN
972-1001
30
2
X:972-1001
Y:972-1001
30
30
1.26
ENST00000399799
26
ENSE00000948804
chr18:
18547901-18547713
189
ROCK1_HUMAN
1002-1064
63
2
X:1002-1013
Y:1002-1014
12
13
1.27
ENST00000399799
27
ENSE00001133063
chr18:
18547037-18546878
160
ROCK1_HUMAN
1065-1118
54
0
-
-
1.28
ENST00000399799
28
ENSE00001133053
chr18:
18540167-18540097
71
ROCK1_HUMAN
1118-1141
24
0
-
-
1.29
ENST00000399799
29
ENSE00001106113
chr18:
18539889-18539801
89
ROCK1_HUMAN
1142-1171
30
0
-
-
1.30
ENST00000399799
30
ENSE00001659208
chr18:
18535206-18535128
79
ROCK1_HUMAN
1171-1197
27
0
-
-
1.31
ENST00000399799
31
ENSE00001592636
chr18:
18535005-18534744
262
ROCK1_HUMAN
1198-1285
88
0
-
-
1.32
ENST00000399799
32
ENSE00001652301
chr18:
18533746-18533539
208
ROCK1_HUMAN
1285-1354
70
0
-
-
1.33
ENST00000399799
33
ENSE00001540219
chr18:
18531348-18529701
1648
ROCK1_HUMAN
1354-1354
1
0
-
-
[
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1s1ca_ (A:)
1b: SCOP_d1s1cb_ (B:)
2a: SCOP_d1s1cx_ (X:)
2b: SCOP_d1s1cy_ (Y:)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
RhoA
(19)
Human (Homo sapiens) [TaxId: 9606]
(19)
1a
d1s1ca_
A:
1b
d1s1cb_
B:
Class
:
Coiled coil proteins
(689)
Fold
:
Parallel coiled-coil
(407)
Superfamily
:
G protein-binding domain
(4)
Family
:
RhoA-binding domain
(2)
Protein domain
:
Rho-associated, coiled-coil containing protein kinase
(2)
Human (Homo sapiens) [TaxId: 9606]
(1)
2a
d1s1cx_
X:
2b
d1s1cy_
Y:
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1s1cA00 (A:3-181)
1b: CATH_1s1cB00 (B:3-181)
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)
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
1s1cA00
A:3-181
1b
1s1cB00
B:3-181
[
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Ras_1s1cB01 (B:7-180)
1b: PFAM_Ras_1s1cB02 (B:7-180)
2a: PFAM_Rho_Binding_1s1cY01 (Y:948-1014)
2b: PFAM_Rho_Binding_1s1cY02 (Y:948-1014)
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Clans
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(
)
Clan
:
P-loop_NTPase
(1112)
Family
:
Ras
(176)
Homo sapiens (Human)
(141)
1a
Ras-1s1cB01
B:7-180
1b
Ras-1s1cB02
B:7-180
Clan
:
no clan defined [family: Rho_Binding]
(2)
Family
:
Rho_Binding
(2)
Homo sapiens (Human)
(1)
2a
Rho_Binding-1s1cY01
Y:948-1014
2b
Rho_Binding-1s1cY02
Y:948-1014
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