PLEASE WAIT...
Getting 'Biological Unit' information from database.
PLEASE WAIT...
Getting 'Hetero Component' information from database.
PLEASE WAIT...
Getting 'Site' information from database.
PLEASE WAIT...
Getting 'PROSITE' information from database.
PLEASE WAIT...
Getting 'Exon' information from database.
1R3A
Theor. Model
Info
Theoretical Model (107 KB)
(using Jmol or JSmol)
spin
show selected part
auto zoom/center
Standard Views
(
Basic
|
Advanced
Interface
)
(
Basic
|
Advanced
Interface
)
Help
(1)
Title
:
THEORETICAL MODEL OF HUMAN GALACTOSE-1-PHOSPHATE URIDYLYL TRANSFERASE (GALT)
Authors
:
A. Marabotti, A. M. Facchiano
Date
:
01 Oct 03 (Deposition) - 07 Dec 04 (Release) - 15 Feb 05 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A,B
Keywords
:
Theoretical Model, Galactose Metabolism, Galactosemia
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Marabotti, A. M. Facchiano
Homology Modeling Studies On Human Galactose-1-Phosphate Uridylyltransferase And On Its Galactosemia-Related Mutant Q188R Provide An Explanation Of Molecular Effects Of The Mutation On Homo- And Heterodimers.
J. Med. Chem. V. 48 773 2005
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(0, 0)
Info
All Hetero Components
View:
Select:
Label:
Sorry, no Info available
[
close Hetero component info
]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(134, 268)
Info
(mutated residues are not available)
All SNPs/Variants
001: VAR_068532 (T23A, chain A/B, )
002: VAR_068533 (D28H, chain A/B, )
003: VAR_002548 (D28Y, chain A/B, )
004: VAR_002549 (I32N, chain A/B, )
005: VAR_068534 (R33H, chain A/B, )
006: VAR_072793 (R33P, chain A/B, )
007: VAR_068535 (Y34N, chain A/B, )
008: VAR_002550 (Q38P, chain A/B, )
009: VAR_002551 (V44L, chain A/B, )
010: VAR_002552 (V44M, chain A/B, )
011: VAR_008042 (S45L, chain A/B, )
012: VAR_002553 (R51L, chain A/B, )
013: VAR_023328 (R51Q, chain A/B, )
014: VAR_002554 (G55C, chain A/B, )
015: VAR_002555 (L62M, chain A/B, )
016: VAR_002556 (R67C, chain A/B, )
017: VAR_002557 (L74P, chain A/B, )
018: VAR_002558 (A81T, chain A/B, )
019: VAR_072794 (G83V, chain A/B, )
020: VAR_068824 (Y89H, chain A/B, )
021: VAR_002559 (N97S, chain A/B, )
022: VAR_002560 (D98N, chain A/B, )
023: VAR_068825 (Q103R, chain A/B, )
024: VAR_068536 (S112R, chain A/B, )
025: VAR_002561 (D113N, chain A/B, )
026: VAR_002562 (H114L, chain A/B, )
027: VAR_002563 (F117S, chain A/B, )
028: VAR_002564 (Q118H, chain A/B, )
029: VAR_002565 (R123G, chain A/B, )
030: VAR_002566 (R123Q, chain A/B, )
031: VAR_002567 (V125A, chain A/B, )
032: VAR_002568 (K127E, chain A/B, )
033: VAR_008043 (M129T, chain A/B, )
034: VAR_002569 (C130Y, chain A/B, )
035: VAR_068537 (H132Q, chain A/B, )
036: VAR_002570 (H132Y, chain A/B, )
037: VAR_002571 (S135L, chain A/B, )
038: VAR_023329 (S135W, chain A/B, )
039: VAR_002572 (T138M, chain A/B, )
040: VAR_002573 (L139P, chain A/B, )
041: VAR_002574 (M142K, chain A/B, )
042: VAR_072795 (M142T, chain A/B, )
043: VAR_002575 (M142V, chain A/B, )
044: VAR_002576 (S143L, chain A/B, )
045: VAR_002577 (R148G, chain A/B, )
046: VAR_002578 (R148Q, chain A/B, )
047: VAR_002579 (R148W, chain A/B, )
048: VAR_002580 (V150L, chain A/B, )
049: VAR_002581 (V151A, chain A/B, )
050: VAR_002582 (W154G, chain A/B, )
051: VAR_068826 (P166A, chain A/B, )
052: VAR_008044 (W167R, chain A/B, )
053: VAR_068538 (V168L, chain A/B, )
054: VAR_068539 (I170T, chain A/B, )
055: VAR_002583 (F171S, chain A/B, )
056: VAR_072796 (G175D, chain A/B, )
057: VAR_002584 (G179D, chain A/B, )
058: VAR_068540 (S181A, chain A/B, )
059: VAR_068827 (S181F, chain A/B, )
060: VAR_002585 (P183T, chain A/B, )
061: VAR_002586 (H184Q, chain A/B, )
062: VAR_068541 (P185H, chain A/B, )
063: VAR_068828 (P185L, chain A/B, )
064: VAR_068542 (P185S, chain A/B, )
065: VAR_002587 (Q188R, chain A/B, )
066: VAR_068543 (S192G, chain A/B, )
067: VAR_002588 (S192N, chain A/B, )
068: VAR_002589 (F194L, chain A/B, )
069: VAR_002590 (L195P, chain A/B, )
070: VAR_002591 (I198M, chain A/B, )
071: VAR_002592 (I198T, chain A/B, )
072: VAR_002593 (A199T, chain A/B, )
073: VAR_068544 (R201C, chain A/B, )
074: VAR_002594 (R201H, chain A/B, )
075: VAR_002595 (E203K, chain A/B, )
076: VAR_008045 (R204P, chain A/B, )
077: VAR_002596 (Y209C, chain A/B, )
078: VAR_002597 (Y209S, chain A/B, )
079: VAR_002598 (Q212H, chain A/B, )
080: VAR_002599 (L217P, chain A/B, )
081: VAR_068545 (E220K, chain A/B, )
082: VAR_068546 (R223S, chain A/B, )
083: VAR_002600 (L226P, chain A/B, )
084: VAR_068547 (L227P, chain A/B, )
085: VAR_023330 (K229N, chain A/B, )
086: VAR_072797 (R231C, chain A/B, )
087: VAR_002601 (R231H, chain A/B, )
088: VAR_072798 (P244S, chain A/B, )
089: VAR_002602 (W249R, chain A/B, )
090: VAR_002603 (Y251C, chain A/B, )
091: VAR_002604 (Y251S, chain A/B, )
092: VAR_023331 (Q252H, chain A/B, )
093: VAR_002605 (R258C, chain A/B, )
094: VAR_068548 (R259Q, chain A/B, )
095: VAR_002606 (R259W, chain A/B, )
096: VAR_002607 (R262P, chain A/B, )
097: VAR_068549 (P265A, chain A/B, )
098: VAR_072799 (L267R, chain A/B, )
099: VAR_072800 (L267V, chain A/B, )
100: VAR_072801 (E271D, chain A/B, )
101: VAR_008047 (R272G, chain A/B, )
102: VAR_068550 (I278N, chain A/B, )
103: VAR_002608 (L282V, chain A/B, )
104: VAR_002609 (K285N, chain A/B, )
105: VAR_068829 (K285R, chain A/B, )
106: VAR_068551 (L289F, chain A/B, )
107: VAR_002610 (L289R, chain A/B, )
108: VAR_002611 (E291K, chain A/B, )
109: VAR_068552 (E291V, chain A/B, )
110: VAR_008048 (F294Y, chain A/B, )
111: VAR_002612 (E308K, chain A/B, )
112: VAR_002613 (N314D, chain A/B, )
113: VAR_002614 (Q317H, chain A/B, )
114: VAR_002615 (Q317R, chain A/B, )
115: VAR_002616 (H319Q, chain A/B, )
116: VAR_002617 (A320T, chain A/B, )
117: VAR_002618 (Y323D, chain A/B, )
118: VAR_002619 (Y323H, chain A/B, )
119: VAR_002620 (P324S, chain A/B, )
120: VAR_002621 (P325L, chain A/B, )
121: VAR_068553 (L327P, chain A/B, )
122: VAR_002622 (R328H, chain A/B, )
123: VAR_002623 (S329F, chain A/B, )
124: VAR_002624 (A330V, chain A/B, )
125: VAR_002625 (R333G, chain A/B, )
126: VAR_068830 (R333L, chain A/B, )
127: VAR_002626 (R333Q, chain A/B, )
128: VAR_002627 (R333W, chain A/B, )
129: VAR_002628 (K334R, chain A/B, )
130: VAR_002629 (M336L, chain A/B, )
131: VAR_068554 (L342I, chain A/B, )
132: VAR_002630 (Q344K, chain A/B, )
133: VAR_068555 (A345D, chain A/B, )
134: VAR_002631 (T350A, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
001
UniProt
VAR_068532
T
23
A
GALT_HUMAN
Disease (GALCT)
---
A/B
T
23
A
002
UniProt
VAR_068533
D
28
H
GALT_HUMAN
Disease (GALCT)
---
A/B
D
28
H
003
UniProt
VAR_002548
D
28
Y
GALT_HUMAN
Disease (GALCT)
---
A/B
D
28
Y
004
UniProt
VAR_002549
I
32
N
GALT_HUMAN
Disease (GALCT)
---
A/B
I
32
N
005
UniProt
VAR_068534
R
33
H
GALT_HUMAN
Disease (GALCT)
---
A/B
R
33
H
006
UniProt
VAR_072793
R
33
P
GALT_HUMAN
Disease (GALCT)
---
A/B
R
33
P
007
UniProt
VAR_068535
Y
34
N
GALT_HUMAN
Disease (GALCT)
---
A/B
Y
34
N
008
UniProt
VAR_002550
Q
38
P
GALT_HUMAN
Disease (GALCT)
---
A/B
Q
38
P
009
UniProt
VAR_002551
V
44
L
GALT_HUMAN
Disease (GALCT)
---
A/B
V
44
L
010
UniProt
VAR_002552
V
44
M
GALT_HUMAN
Disease (GALCT)
---
A/B
V
44
M
011
UniProt
VAR_008042
S
45
L
GALT_HUMAN
Disease (GALCT)
---
A/B
S
45
L
012
UniProt
VAR_002553
R
51
L
GALT_HUMAN
Disease (GALCT)
---
A/B
R
51
L
013
UniProt
VAR_023328
R
51
Q
GALT_HUMAN
Disease (GALCT)
---
A/B
R
51
Q
014
UniProt
VAR_002554
G
55
C
GALT_HUMAN
Disease (GALCT)
---
A/B
G
55
C
015
UniProt
VAR_002555
L
62
M
GALT_HUMAN
Polymorphism
1800461
A/B
L
62
M
016
UniProt
VAR_002556
R
67
C
GALT_HUMAN
Disease (GALCT)
---
A/B
R
67
C
017
UniProt
VAR_002557
L
74
P
GALT_HUMAN
Disease (GALCT)
---
A/B
L
74
P
018
UniProt
VAR_002558
A
81
T
GALT_HUMAN
Disease (GALCT)
---
A/B
A
81
T
019
UniProt
VAR_072794
G
83
V
GALT_HUMAN
Disease (GALCT)
---
A/B
G
83
V
020
UniProt
VAR_068824
Y
89
H
GALT_HUMAN
Disease (GALCT)
---
A/B
Y
89
H
021
UniProt
VAR_002559
N
97
S
GALT_HUMAN
Disease (GALCT)
---
A/B
N
97
S
022
UniProt
VAR_002560
D
98
N
GALT_HUMAN
Disease (GALCT)
---
A/B
D
98
N
023
UniProt
VAR_068825
Q
103
R
GALT_HUMAN
Disease (GALCT)
---
A/B
Q
103
R
024
UniProt
VAR_068536
S
112
R
GALT_HUMAN
Disease (GALCT)
---
A/B
S
112
R
025
UniProt
VAR_002561
D
113
N
GALT_HUMAN
Disease (GALCT)
---
A/B
D
113
N
026
UniProt
VAR_002562
H
114
L
GALT_HUMAN
Disease (GALCT)
---
A/B
H
114
L
027
UniProt
VAR_002563
F
117
S
GALT_HUMAN
Disease (GALCT)
---
A/B
F
117
S
028
UniProt
VAR_002564
Q
118
H
GALT_HUMAN
Disease (GALCT)
---
A/B
Q
118
H
029
UniProt
VAR_002565
R
123
G
GALT_HUMAN
Disease (GALCT)
---
A/B
R
123
G
030
UniProt
VAR_002566
R
123
Q
GALT_HUMAN
Disease (GALCT)
---
A/B
R
123
Q
031
UniProt
VAR_002567
V
125
A
GALT_HUMAN
Disease (GALCT)
---
A/B
V
125
A
032
UniProt
VAR_002568
K
127
E
GALT_HUMAN
Disease (GALCT)
---
A/B
K
127
E
033
UniProt
VAR_008043
M
129
T
GALT_HUMAN
Disease (GALCT)
---
A/B
M
129
T
034
UniProt
VAR_002569
C
130
Y
GALT_HUMAN
Disease (GALCT)
---
A/B
C
130
Y
035
UniProt
VAR_068537
H
132
Q
GALT_HUMAN
Disease (GALCT)
---
A/B
H
132
Q
036
UniProt
VAR_002570
H
132
Y
GALT_HUMAN
Disease (GALCT)
---
A/B
H
132
Y
037
UniProt
VAR_002571
S
135
L
GALT_HUMAN
Disease (GALCT)
111033690
A/B
S
135
L
038
UniProt
VAR_023329
S
135
W
GALT_HUMAN
Disease (GALCT)
111033690
A/B
S
135
W
039
UniProt
VAR_002572
T
138
M
GALT_HUMAN
Disease (GALCT)
---
A/B
T
138
M
040
UniProt
VAR_002573
L
139
P
GALT_HUMAN
Disease (GALCT)
---
A/B
L
139
P
041
UniProt
VAR_002574
M
142
K
GALT_HUMAN
Disease (GALCT)
---
A/B
M
142
K
042
UniProt
VAR_072795
M
142
T
GALT_HUMAN
Disease (GALCT)
---
A/B
M
142
T
043
UniProt
VAR_002575
M
142
V
GALT_HUMAN
Disease (GALCT)
---
A/B
M
142
V
044
UniProt
VAR_002576
S
143
L
GALT_HUMAN
Disease (GALCT)
---
A/B
S
143
L
045
UniProt
VAR_002577
R
148
G
GALT_HUMAN
Disease (GALCT)
---
A/B
R
148
G
046
UniProt
VAR_002578
R
148
Q
GALT_HUMAN
Disease (GALCT)
---
A/B
R
148
Q
047
UniProt
VAR_002579
R
148
W
GALT_HUMAN
Disease (GALCT)
---
A/B
R
148
W
048
UniProt
VAR_002580
V
150
L
GALT_HUMAN
Disease (GALCT)
---
A/B
V
150
L
049
UniProt
VAR_002581
V
151
A
GALT_HUMAN
Disease (GALCT)
---
A/B
V
151
A
050
UniProt
VAR_002582
W
154
G
GALT_HUMAN
Disease (GALCT)
---
A/B
W
154
G
051
UniProt
VAR_068826
P
166
A
GALT_HUMAN
Disease (GALCT)
---
A/B
P
166
A
052
UniProt
VAR_008044
W
167
R
GALT_HUMAN
Disease (GALCT)
---
A/B
W
167
R
053
UniProt
VAR_068538
V
168
L
GALT_HUMAN
Disease (GALCT)
---
A/B
V
168
L
054
UniProt
VAR_068539
I
170
T
GALT_HUMAN
Disease (GALCT)
---
A/B
I
170
T
055
UniProt
VAR_002583
F
171
S
GALT_HUMAN
Disease (GALCT)
---
A/B
F
171
S
056
UniProt
VAR_072796
G
175
D
GALT_HUMAN
Disease (GALCT)
---
A/B
G
175
D
057
UniProt
VAR_002584
G
179
D
GALT_HUMAN
Disease (GALCT)
---
A/B
G
179
D
058
UniProt
VAR_068540
S
181
A
GALT_HUMAN
Disease (GALCT)
---
A/B
S
181
A
059
UniProt
VAR_068827
S
181
F
GALT_HUMAN
Disease (GALCT)
---
A/B
S
181
F
060
UniProt
VAR_002585
P
183
T
GALT_HUMAN
Disease (GALCT)
---
A/B
P
183
T
061
UniProt
VAR_002586
H
184
Q
GALT_HUMAN
Disease (GALCT)
---
A/B
H
184
Q
062
UniProt
VAR_068541
P
185
H
GALT_HUMAN
Disease (GALCT)
---
A/B
P
185
H
063
UniProt
VAR_068828
P
185
L
GALT_HUMAN
Disease (GALCT)
---
A/B
P
185
L
064
UniProt
VAR_068542
P
185
S
GALT_HUMAN
Disease (GALCT)
---
A/B
P
185
S
065
UniProt
VAR_002587
Q
188
R
GALT_HUMAN
Disease (GALCT)
75391579
A/B
Q
188
R
066
UniProt
VAR_068543
S
192
G
GALT_HUMAN
Disease (GALCT)
---
A/B
S
192
G
067
UniProt
VAR_002588
S
192
N
GALT_HUMAN
Disease (GALCT)
---
A/B
S
192
N
068
UniProt
VAR_002589
F
194
L
GALT_HUMAN
Disease (GALCT)
---
A/B
F
194
L
069
UniProt
VAR_002590
L
195
P
GALT_HUMAN
Disease (GALCT)
---
A/B
L
195
P
070
UniProt
VAR_002591
I
198
M
GALT_HUMAN
Disease (GALCT)
---
A/B
I
198
M
071
UniProt
VAR_002592
I
198
T
GALT_HUMAN
Disease (GALCT)
---
A/B
I
198
T
072
UniProt
VAR_002593
A
199
T
GALT_HUMAN
Disease (GALCT)
---
A/B
A
199
T
073
UniProt
VAR_068544
R
201
C
GALT_HUMAN
Disease (GALCT)
---
A/B
R
201
C
074
UniProt
VAR_002594
R
201
H
GALT_HUMAN
Disease (GALCT)
---
A/B
R
201
H
075
UniProt
VAR_002595
E
203
K
GALT_HUMAN
Disease (GALCT)
---
A/B
E
203
K
076
UniProt
VAR_008045
R
204
P
GALT_HUMAN
Disease (GALCT)
---
A/B
R
204
P
077
UniProt
VAR_002596
Y
209
C
GALT_HUMAN
Disease (GALCT)
---
A/B
Y
209
C
078
UniProt
VAR_002597
Y
209
S
GALT_HUMAN
Disease (GALCT)
---
A/B
Y
209
S
079
UniProt
VAR_002598
Q
212
H
GALT_HUMAN
Disease (GALCT)
---
A/B
Q
212
H
080
UniProt
VAR_002599
L
217
P
GALT_HUMAN
Disease (GALCT)
---
A/B
L
217
P
081
UniProt
VAR_068545
E
220
K
GALT_HUMAN
Disease (GALCT)
---
A/B
E
220
K
082
UniProt
VAR_068546
R
223
S
GALT_HUMAN
Disease (GALCT)
---
A/B
R
223
S
083
UniProt
VAR_002600
L
226
P
GALT_HUMAN
Disease (GALCT)
---
A/B
L
226
P
084
UniProt
VAR_068547
L
227
P
GALT_HUMAN
Disease (GALCT)
---
A/B
L
227
P
085
UniProt
VAR_023330
K
229
N
GALT_HUMAN
Disease (GALCT)
---
A/B
K
229
N
086
UniProt
VAR_072797
R
231
C
GALT_HUMAN
Disease (GALCT)
---
A/B
R
231
C
087
UniProt
VAR_002601
R
231
H
GALT_HUMAN
Disease (GALCT)
---
A/B
R
231
H
088
UniProt
VAR_072798
P
244
S
GALT_HUMAN
Disease (GALCT)
---
A/B
P
244
S
089
UniProt
VAR_002602
W
249
R
GALT_HUMAN
Disease (GALCT)
---
A/B
W
249
R
090
UniProt
VAR_002603
Y
251
C
GALT_HUMAN
Disease (GALCT)
---
A/B
Y
251
C
091
UniProt
VAR_002604
Y
251
S
GALT_HUMAN
Disease (GALCT)
---
A/B
Y
251
S
092
UniProt
VAR_023331
Q
252
H
GALT_HUMAN
Disease (GALCT)
---
A/B
Q
252
H
093
UniProt
VAR_002605
R
258
C
GALT_HUMAN
Disease (GALCT)
---
A/B
R
258
C
094
UniProt
VAR_068548
R
259
Q
GALT_HUMAN
Disease (GALCT)
---
A/B
R
259
Q
095
UniProt
VAR_002606
R
259
W
GALT_HUMAN
Disease (GALCT)
---
A/B
R
259
W
096
UniProt
VAR_002607
R
262
P
GALT_HUMAN
Disease (GALCT)
---
A/B
R
262
P
097
UniProt
VAR_068549
P
265
A
GALT_HUMAN
Disease (GALCT)
---
A/B
P
265
A
098
UniProt
VAR_072799
L
267
R
GALT_HUMAN
Disease (GALCT)
---
A/B
L
267
R
099
UniProt
VAR_072800
L
267
V
GALT_HUMAN
Disease (GALCT)
---
A/B
L
267
V
100
UniProt
VAR_072801
E
271
D
GALT_HUMAN
Disease (GALCT)
---
A/B
E
271
D
101
UniProt
VAR_008047
R
272
G
GALT_HUMAN
Disease (GALCT)
---
A/B
R
272
G
102
UniProt
VAR_068550
I
278
N
GALT_HUMAN
Disease (GALCT)
---
A/B
I
278
N
103
UniProt
VAR_002608
L
282
V
GALT_HUMAN
Disease (GALCT)
---
A/B
L
282
V
104
UniProt
VAR_002609
K
285
N
GALT_HUMAN
Disease (GALCT)
---
A/B
K
285
N
105
UniProt
VAR_068829
K
285
R
GALT_HUMAN
Disease (GALCT)
---
A/B
K
285
R
106
UniProt
VAR_068551
L
289
F
GALT_HUMAN
Disease (GALCT)
---
A/B
L
289
F
107
UniProt
VAR_002610
L
289
R
GALT_HUMAN
Disease (GALCT)
---
A/B
L
289
R
108
UniProt
VAR_002611
E
291
K
GALT_HUMAN
Disease (GALCT)
---
A/B
E
291
K
109
UniProt
VAR_068552
E
291
V
GALT_HUMAN
Disease (GALCT)
---
A/B
E
291
V
110
UniProt
VAR_008048
F
294
Y
GALT_HUMAN
Disease (GALCT)
---
A/B
F
294
Y
111
UniProt
VAR_002612
E
308
K
GALT_HUMAN
Disease (GALCT)
---
A/B
E
308
K
112
UniProt
VAR_002613
N
314
D
GALT_HUMAN
Disease (GALCT)
2070074
A/B
N
314
D
113
UniProt
VAR_002614
Q
317
H
GALT_HUMAN
Disease (GALCT)
---
A/B
Q
317
H
114
UniProt
VAR_002615
Q
317
R
GALT_HUMAN
Disease (GALCT)
---
A/B
Q
317
R
115
UniProt
VAR_002616
H
319
Q
GALT_HUMAN
Disease (GALCT)
---
A/B
H
319
Q
116
UniProt
VAR_002617
A
320
T
GALT_HUMAN
Disease (GALCT)
---
A/B
A
320
T
117
UniProt
VAR_002618
Y
323
D
GALT_HUMAN
Disease (GALCT)
---
A/B
Y
323
D
118
UniProt
VAR_002619
Y
323
H
GALT_HUMAN
Disease (GALCT)
---
A/B
Y
323
H
119
UniProt
VAR_002620
P
324
S
GALT_HUMAN
Disease (GALCT)
---
A/B
P
324
S
120
UniProt
VAR_002621
P
325
L
GALT_HUMAN
Disease (GALCT)
---
A/B
P
325
L
121
UniProt
VAR_068553
L
327
P
GALT_HUMAN
Disease (GALCT)
---
A/B
L
327
P
122
UniProt
VAR_002622
R
328
H
GALT_HUMAN
Disease (GALCT)
---
A/B
R
328
H
123
UniProt
VAR_002623
S
329
F
GALT_HUMAN
Disease (GALCT)
---
A/B
S
329
F
124
UniProt
VAR_002624
A
330
V
GALT_HUMAN
Disease (GALCT)
---
A/B
A
330
V
125
UniProt
VAR_002625
R
333
G
GALT_HUMAN
Disease (GALCT)
---
A/B
R
333
G
126
UniProt
VAR_068830
R
333
L
GALT_HUMAN
Disease (GALCT)
---
A/B
R
333
L
127
UniProt
VAR_002626
R
333
Q
GALT_HUMAN
Disease (GALCT)
---
A/B
R
333
Q
128
UniProt
VAR_002627
R
333
W
GALT_HUMAN
Disease (GALCT)
---
A/B
R
333
W
129
UniProt
VAR_002628
K
334
R
GALT_HUMAN
Disease (GALCT)
---
A/B
K
334
R
130
UniProt
VAR_002629
M
336
L
GALT_HUMAN
Disease (GALCT)
---
A/B
M
336
L
131
UniProt
VAR_068554
L
342
I
GALT_HUMAN
Disease (GALCT)
---
A/B
L
342
I
132
UniProt
VAR_002630
Q
344
K
GALT_HUMAN
Disease (GALCT)
---
A/B
Q
344
K
133
UniProt
VAR_068555
A
345
D
GALT_HUMAN
Disease (GALCT)
---
A/B
A
345
D
134
UniProt
VAR_002631
T
350
A
GALT_HUMAN
Disease (GALCT)
---
A/B
T
350
A
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: GAL_P_UDP_TRANSF_I (A:171-188,B:171-188)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GAL_P_UDP_TRANSF_I
PS00117
Galactose-1-phosphate uridyl transferase family 1 active site signature.
GALT_HUMAN
171-188
2
A:171-188
B:171-188
[
close PROSITE info
]
Exons
(11, 22)
Info
All Exons
Exon 1.2c (A:21-28 | B:21-28)
Exon 1.2j (A:28-84 | B:28-84)
Exon 1.2n (A:85-110 | B:85-110)
Exon 1.2r (A:110-126 | B:110-126)
Exon 1.2t (A:126-169 | B:126-169)
Exon 1.2w (A:170-188 | B:170-188)
Exon 1.3b (A:189-229 | B:189-229)
Exon 1.3i (A:230-274 | B:230-274)
Exon 1.4a (A:274-302 | B:274-302)
Exon 1.4d (A:302-353 | B:302-353)
Exon 1.5c (A:354-379 | B:354-379)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.2c
02: Boundary 1.2c/1.2j
03: Boundary 1.2j/1.2n
04: Boundary 1.2n/1.2r
05: Boundary 1.2r/1.2t
06: Boundary 1.2t/1.2w
07: Boundary 1.2w/1.3b
08: Boundary 1.3b/1.3i
09: Boundary 1.3i/1.4a
10: Boundary 1.4a/1.4d
11: Boundary 1.4d/1.5c
12: Boundary 1.5c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2c
ENST00000378842
2c
ENSE00001825305
chr9:
34646660-34646783
124
GALT_HUMAN
1-28
28
2
A:21-28
B:21-28
8
8
1.2j
ENST00000378842
2j
ENSE00001657371
chr9:
34647086-34647255
170
GALT_HUMAN
28-84
57
2
A:28-84
B:28-84
57
57
1.2n
ENST00000378842
2n
ENSE00000832949
chr9:
34647489-34647564
76
GALT_HUMAN
85-110
26
2
A:85-110
B:85-110
26
26
1.2r
ENST00000378842
2r
ENSE00001238057
chr9:
34647654-34647702
49
GALT_HUMAN
110-126
17
2
A:110-126
B:110-126
17
17
1.2t
ENST00000378842
2t
ENSE00000832947
chr9:
34647829-34647958
130
GALT_HUMAN
126-169
44
2
A:126-169
B:126-169
44
44
1.2w
ENST00000378842
2w
ENSE00000832946
chr9:
34648112-34648168
57
GALT_HUMAN
170-188
19
2
A:170-188
B:170-188
19
19
1.3b
ENST00000378842
3b
ENSE00001238041
chr9:
34648331-34648453
123
GALT_HUMAN
189-229
41
2
A:189-229
B:189-229
41
41
1.3i
ENST00000378842
3i
ENSE00000832944
chr9:
34648759-34648891
133
GALT_HUMAN
230-274
45
2
A:230-274
B:230-274
45
45
1.4a
ENST00000378842
4a
ENSE00001238122
chr9:
34648995-34649078
84
GALT_HUMAN
274-302
29
2
A:274-302
B:274-302
29
29
1.4d
ENST00000378842
4d
ENSE00001238079
chr9:
34649407-34649561
155
GALT_HUMAN
302-353
52
2
A:302-353
B:302-353
52
52
1.5c
ENST00000378842
5c
ENSE00001876755
chr9:
34650366-34651032
667
GALT_HUMAN
354-379
26
2
A:354-379
B:354-379
26
26
[
close EXON info
]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
by Amino Acid
by Nucleotide
by Temperature
by Charge
by Rainbow (Group)
by Custom Color
Background Coloring
Choose
molecule
background
color...
[
close
]
RGB value
(e.g.: "#3cb371" or "60,179,113")
Stereo
Graphics Window
x
pixel
Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
[
close Script example commands
]
Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
QuickSearch:
by PDB,NDB,UniProt,PROSITE Code or
Search Term(s)
Show PDB file:
Theoretical Model (107 KB)
Header - Theoretical Model
Plain Text
HTML (compressed size)
use JSmol [Javascript]
use Jmol [Java applet]
Upload:
Select a local file
OR
Enter a remote file address
You can upload any molecular structure file format that is recognized by Jmol,
e.g.: PDB, mmCif, CIF, CML, MOL, XYZ
(also compressed with 'gzip', see the
Jmol documentation
for a complete list)
JenaLib Atlas Page
|
Sequence/Alignment View
1R3A
Jmol Script Commands
|
Jmol Color Schemes
|
Jmol Mouse Manual
|
Jmol Wiki
controls:
collapse
expand
Home
JenaLib
Jmol Scripting
Contact
Help
