1R3A - JenaLib

Theoretical Model (Jmol Viewer)

Title :   THEORETICAL MODEL OF HUMAN GALACTOSE-1-PHOSPHATE URIDYLYL TRANSFERASE (GALT)

Authors :   A. Marabotti, A. M. Facchiano

Date :   01 Oct 03 (Deposition) - 07 Dec 04 (Release) - 15 Feb 05 (Revision)

Method :   THEORETICAL MODEL

Resolution :   NOT APPLICABLE

Chains :   Theor. Model : A,B

Keywords :   Theoretical Model, Galactose Metabolism, Galactosemia (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Marabotti, A. M. Facchiano
Homology Modeling Studies On Human Galactose-1-Phosphate Uridylyltransferase And On Its Galactosemia-Related Mutant Q188R Provide An Explanation Of Molecular Effects Of The Mutation On Homo- And Heterodimers.
J. Med. Chem. V. 48 773 2005
PubMed: search
(for further references see the PDB file header)

Molecule 1 - GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
	Chains	:	A, B
	EC Number	:	2.7.7.12
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Synonym	:	GAL-1-P URIDYLYLTRANSFERASE, UDP-GLUCOSE--HEXOSE- 1-PHOSPHATE URIDYLYLTRANSFERASE


Theoretical Model	:

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 1R3A)

(no "Site" information available for 1R3A)

(no "SS Bond" information available for 1R3A)

(no "Cis Peptide Bond" information available for 1R3A)

Theoretical Model (134, 268)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
001	UniProt	VAR_068532	T	23	A	GALT_HUMAN	Disease (GALCT)	111033635	A/B	T	23	A
002	UniProt	VAR_068533	D	28	H	GALT_HUMAN	Disease (GALCT)	111033636	A/B	D	28	H
003	UniProt	VAR_002548	D	28	Y	GALT_HUMAN	Disease (GALCT)	111033636	A/B	D	28	Y
004	UniProt	VAR_002549	I	32	N	GALT_HUMAN	Disease (GALCT)	111033644	A/B	I	32	N
005	UniProt	VAR_068534	R	33	H	GALT_HUMAN	Disease (GALCT)	111033829	A/B	R	33	H
006	UniProt	VAR_072793	R	33	P	GALT_HUMAN	Disease (GALCT)	---	A/B	R	33	P
007	UniProt	VAR_068535	Y	34	N	GALT_HUMAN	Disease (GALCT)	111033836	A/B	Y	34	N
008	UniProt	VAR_002550	Q	38	P	GALT_HUMAN	Disease (GALCT)	111033646	A/B	Q	38	P
009	UniProt	VAR_002551	V	44	L	GALT_HUMAN	Disease (GALCT)	111033647	A/B	V	44	L
010	UniProt	VAR_002552	V	44	M	GALT_HUMAN	Disease (GALCT)	111033647	A/B	V	44	M
011	UniProt	VAR_008042	S	45	L	GALT_HUMAN	Disease (GALCT)	111033652	A/B	S	45	L
012	UniProt	VAR_002553	R	51	L	GALT_HUMAN	Disease (GALCT)	111033648	A/B	R	51	L
013	UniProt	VAR_023328	R	51	Q	GALT_HUMAN	Disease (GALCT)	111033648	A/B	R	51	Q
014	UniProt	VAR_002554	G	55	C	GALT_HUMAN	Disease (GALCT)	111033654	A/B	G	55	C
015	UniProt	VAR_002555	L	62	M	GALT_HUMAN	Polymorphism	1800461	A/B	L	62	M
016	UniProt	VAR_002556	R	67	C	GALT_HUMAN	Disease (GALCT)	111033658	A/B	R	67	C
017	UniProt	VAR_002557	L	74	P	GALT_HUMAN	Disease (GALCT)	111033663	A/B	L	74	P
018	UniProt	VAR_002558	A	81	T	GALT_HUMAN	Disease (GALCT)	111033665	A/B	A	81	T
019	UniProt	VAR_072794	G	83	V	GALT_HUMAN	Disease (GALCT)	---	A/B	G	83	V
020	UniProt	VAR_068824	Y	89	H	GALT_HUMAN	Disease (GALCT)	111033666	A/B	Y	89	H
021	UniProt	VAR_002559	N	97	S	GALT_HUMAN	Disease (GALCT)	111033669	A/B	N	97	S
022	UniProt	VAR_002560	D	98	N	GALT_HUMAN	Disease (GALCT)	111033670	A/B	D	98	N
023	UniProt	VAR_068825	Q	103	R	GALT_HUMAN	Disease (GALCT)	367543252	A/B	Q	103	R
024	UniProt	VAR_068536	S	112	R	GALT_HUMAN	Disease (GALCT)	---	A/B	S	112	R
025	UniProt	VAR_002561	D	113	N	GALT_HUMAN	Disease (GALCT)	111033677	A/B	D	113	N
026	UniProt	VAR_002562	H	114	L	GALT_HUMAN	Disease (GALCT)	111033678	A/B	H	114	L
027	UniProt	VAR_002563	F	117	S	GALT_HUMAN	Disease (GALCT)	111033679	A/B	F	117	S
028	UniProt	VAR_002564	Q	118	H	GALT_HUMAN	Disease (GALCT)	111033673	A/B	Q	118	H
029	UniProt	VAR_002565	R	123	G	GALT_HUMAN	Disease (GALCT)	111033674	A/B	R	123	G
030	UniProt	VAR_002566	R	123	Q	GALT_HUMAN	Disease (GALCT)	111033675	A/B	R	123	Q
031	UniProt	VAR_002567	V	125	A	GALT_HUMAN	Disease (GALCT)	111033680	A/B	V	125	A
032	UniProt	VAR_002568	K	127	E	GALT_HUMAN	Disease (GALCT)	111033682	A/B	K	127	E
033	UniProt	VAR_008043	M	129	T	GALT_HUMAN	Disease (GALCT)	111033683	A/B	M	129	T
034	UniProt	VAR_002569	C	130	Y	GALT_HUMAN	Disease (GALCT)	367543255	A/B	C	130	Y
035	UniProt	VAR_068537	H	132	Q	GALT_HUMAN	Disease (GALCT)	367543256	A/B	H	132	Q
036	UniProt	VAR_002570	H	132	Y	GALT_HUMAN	Disease (GALCT)	111033688	A/B	H	132	Y
037	UniProt	VAR_002571	S	135	L	GALT_HUMAN	Disease (GALCT)	111033690	A/B	S	135	L
038	UniProt	VAR_023329	S	135	W	GALT_HUMAN	Disease (GALCT)	111033690	A/B	S	135	W
039	UniProt	VAR_002572	T	138	M	GALT_HUMAN	Disease (GALCT)	111033686	A/B	T	138	M
040	UniProt	VAR_002573	L	139	P	GALT_HUMAN	Disease (GALCT)	111033687	A/B	L	139	P
041	UniProt	VAR_002574	M	142	K	GALT_HUMAN	Disease (GALCT)	111033695	A/B	M	142	K
042	UniProt	VAR_072795	M	142	T	GALT_HUMAN	Disease (GALCT)	111033695	A/B	M	142	T
043	UniProt	VAR_002575	M	142	V	GALT_HUMAN	Disease (GALCT)	111033692	A/B	M	142	V
044	UniProt	VAR_002576	S	143	L	GALT_HUMAN	Disease (GALCT)	111033697	A/B	S	143	L
045	UniProt	VAR_002577	R	148	G	GALT_HUMAN	Disease (GALCT)	111033693	A/B	R	148	G
046	UniProt	VAR_002578	R	148	Q	GALT_HUMAN	Disease (GALCT)	111033694	A/B	R	148	Q
047	UniProt	VAR_002579	R	148	W	GALT_HUMAN	Disease (GALCT)	111033693	A/B	R	148	W
048	UniProt	VAR_002580	V	150	L	GALT_HUMAN	Disease (GALCT)	111033699	A/B	V	150	L
049	UniProt	VAR_002581	V	151	A	GALT_HUMAN	Disease (GALCT)	111033701	A/B	V	151	A
050	UniProt	VAR_002582	W	154	G	GALT_HUMAN	Disease (GALCT)	111033702	A/B	W	154	G
051	UniProt	VAR_068826	P	166	A	GALT_HUMAN	Disease (GALCT)	367543257	A/B	P	166	A
052	UniProt	VAR_008044	W	167	R	GALT_HUMAN	Disease (GALCT)	111033708	A/B	W	167	R
053	UniProt	VAR_068538	V	168	L	GALT_HUMAN	Disease (GALCT)	367543258	A/B	V	168	L
054	UniProt	VAR_068539	I	170	T	GALT_HUMAN	Disease (GALCT)	111033839	A/B	I	170	T
055	UniProt	VAR_002583	F	171	S	GALT_HUMAN	Disease (GALCT)	111033715	A/B	F	171	S
056	UniProt	VAR_072796	G	175	D	GALT_HUMAN	Disease (GALCT)	111033718	A/B	G	175	D
057	UniProt	VAR_002584	G	179	D	GALT_HUMAN	Disease (GALCT)	111033720	A/B	G	179	D
058	UniProt	VAR_068540	S	181	A	GALT_HUMAN	Disease (GALCT)	111033828	A/B	S	181	A
059	UniProt	VAR_068827	S	181	F	GALT_HUMAN	Disease (GALCT)	367543259	A/B	S	181	F
060	UniProt	VAR_002585	P	183	T	GALT_HUMAN	Disease (GALCT)	111033721	A/B	P	183	T
061	UniProt	VAR_002586	H	184	Q	GALT_HUMAN	Disease (GALCT)	111033717	A/B	H	184	Q
062	UniProt	VAR_068541	P	185	H	GALT_HUMAN	Disease (GALCT)	111033722	A/B	P	185	H
063	UniProt	VAR_068828	P	185	L	GALT_HUMAN	Disease (GALCT)	111033722	A/B	P	185	L
064	UniProt	VAR_068542	P	185	S	GALT_HUMAN	Disease (GALCT)	111033826	A/B	P	185	S
065	UniProt	VAR_002587	Q	188	R	GALT_HUMAN	Disease (GALCT)	75391579	A/B	Q	188	R
066	UniProt	VAR_068543	S	192	G	GALT_HUMAN	Disease (GALCT)	111033830	A/B	S	192	G
067	UniProt	VAR_002588	S	192	N	GALT_HUMAN	Disease (GALCT)	111033734	A/B	S	192	N
068	UniProt	VAR_002589	F	194	L	GALT_HUMAN	Disease (GALCT)	111033726	A/B	F	194	L
069	UniProt	VAR_002590	L	195	P	GALT_HUMAN	Disease (GALCT)	111033728	A/B	L	195	P
070	UniProt	VAR_002591	I	198	M	GALT_HUMAN	Disease (GALCT)	111033729	A/B	I	198	M
071	UniProt	VAR_002592	I	198	T	GALT_HUMAN	Disease (GALCT)	---	A/B	I	198	T
072	UniProt	VAR_002593	A	199	T	GALT_HUMAN	Disease (GALCT)	111033730	A/B	A	199	T
073	UniProt	VAR_068544	R	201	C	GALT_HUMAN	Disease (GALCT)	111033739	A/B	R	201	C
074	UniProt	VAR_002594	R	201	H	GALT_HUMAN	Disease (GALCT)	111033735	A/B	R	201	H
075	UniProt	VAR_002595	E	203	K	GALT_HUMAN	Disease (GALCT)	111033736	A/B	E	203	K
076	UniProt	VAR_008045	R	204	P	GALT_HUMAN	Disease (GALCT)	111033740	A/B	R	204	P
077	UniProt	VAR_002596	Y	209	C	GALT_HUMAN	Disease (GALCT)	111033744	A/B	Y	209	C
078	UniProt	VAR_002597	Y	209	S	GALT_HUMAN	Disease (GALCT)	111033744	A/B	Y	209	S
079	UniProt	VAR_002598	Q	212	H	GALT_HUMAN	Disease (GALCT)	---	A/B	Q	212	H
080	UniProt	VAR_002599	L	217	P	GALT_HUMAN	Disease (GALCT)	111033741	A/B	L	217	P
081	UniProt	VAR_068545	E	220	K	GALT_HUMAN	Disease (GALCT)	111033747	A/B	E	220	K
082	UniProt	VAR_068546	R	223	S	GALT_HUMAN	Disease (GALCT)	111033750	A/B	R	223	S
083	UniProt	VAR_002600	L	226	P	GALT_HUMAN	Disease (GALCT)	111033752	A/B	L	226	P
084	UniProt	VAR_068547	L	227	P	GALT_HUMAN	Disease (GALCT)	111033846	A/B	L	227	P
085	UniProt	VAR_023330	K	229	N	GALT_HUMAN	Disease (GALCT)	111033753	A/B	K	229	N
086	UniProt	VAR_072797	R	231	C	GALT_HUMAN	Disease (GALCT)	111033749	A/B	R	231	C
087	UniProt	VAR_002601	R	231	H	GALT_HUMAN	Disease (GALCT)	111033754	A/B	R	231	H
088	UniProt	VAR_072798	P	244	S	GALT_HUMAN	Disease (GALCT)	---	A/B	P	244	S
089	UniProt	VAR_002602	W	249	R	GALT_HUMAN	Disease (GALCT)	111033757	A/B	W	249	R
090	UniProt	VAR_002603	Y	251	C	GALT_HUMAN	Disease (GALCT)	111033755	A/B	Y	251	C
091	UniProt	VAR_002604	Y	251	S	GALT_HUMAN	Disease (GALCT)	111033755	A/B	Y	251	S
092	UniProt	VAR_023331	Q	252	H	GALT_HUMAN	Disease (GALCT)	111033769	A/B	Q	252	H
093	UniProt	VAR_002605	R	258	C	GALT_HUMAN	Disease (GALCT)	368166217	A/B	R	258	C
094	UniProt	VAR_068548	R	259	Q	GALT_HUMAN	Disease (GALCT)	---	A/B	R	259	Q
095	UniProt	VAR_002606	R	259	W	GALT_HUMAN	Disease (GALCT)	786204763	A/B	R	259	W
096	UniProt	VAR_002607	R	262	P	GALT_HUMAN	Disease (GALCT)	111033763	A/B	R	262	P
097	UniProt	VAR_068549	P	265	A	GALT_HUMAN	Disease (GALCT)	111033764	A/B	P	265	A
098	UniProt	VAR_072799	L	267	R	GALT_HUMAN	Disease (GALCT)	---	A/B	L	267	R
099	UniProt	VAR_072800	L	267	V	GALT_HUMAN	Disease (GALCT)	---	A/B	L	267	V
100	UniProt	VAR_072801	E	271	D	GALT_HUMAN	Disease (GALCT)	---	A/B	E	271	D
101	UniProt	VAR_008047	R	272	G	GALT_HUMAN	Disease (GALCT)	111033766	A/B	R	272	G
102	UniProt	VAR_068550	I	278	N	GALT_HUMAN	Disease (GALCT)	111033778	A/B	I	278	N
103	UniProt	VAR_002608	L	282	V	GALT_HUMAN	Disease (GALCT)	111033772	A/B	L	282	V
104	UniProt	VAR_002609	K	285	N	GALT_HUMAN	Disease (GALCT)	111033773	A/B	K	285	N
105	UniProt	VAR_068829	K	285	R	GALT_HUMAN	Disease (GALCT)	367543263	A/B	K	285	R
106	UniProt	VAR_068551	L	289	F	GALT_HUMAN	Disease (GALCT)	111033774	A/B	L	289	F
107	UniProt	VAR_002610	L	289	R	GALT_HUMAN	Disease (GALCT)	111033775	A/B	L	289	R
108	UniProt	VAR_002611	E	291	K	GALT_HUMAN	Disease (GALCT)	111033780	A/B	E	291	K
109	UniProt	VAR_068552	E	291	V	GALT_HUMAN	Disease (GALCT)	111033841	A/B	E	291	V
110	UniProt	VAR_008048	F	294	Y	GALT_HUMAN	Disease (GALCT)	111033781	A/B	F	294	Y
111	UniProt	VAR_002612	E	308	K	GALT_HUMAN	Disease (GALCT)	111033784	A/B	E	308	K
112	UniProt	VAR_002613	N	314	D	GALT_HUMAN	Disease (GALCT)	2070074	A/B	N	314	D
113	UniProt	VAR_002614	Q	317	H	GALT_HUMAN	Disease (GALCT)	111033787	A/B	Q	317	H
114	UniProt	VAR_002615	Q	317	R	GALT_HUMAN	Disease (GALCT)	111033786	A/B	Q	317	R
115	UniProt	VAR_002616	H	319	Q	GALT_HUMAN	Disease (GALCT)	111033792	A/B	H	319	Q
116	UniProt	VAR_002617	A	320	T	GALT_HUMAN	Disease (GALCT)	111033795	A/B	A	320	T
117	UniProt	VAR_002618	Y	323	D	GALT_HUMAN	Disease (GALCT)	111033796	A/B	Y	323	D
118	UniProt	VAR_002619	Y	323	H	GALT_HUMAN	Disease (GALCT)	111033796	A/B	Y	323	H
119	UniProt	VAR_002620	P	324	S	GALT_HUMAN	Disease (GALCT)	111033798	A/B	P	324	S
120	UniProt	VAR_002621	P	325	L	GALT_HUMAN	Disease (GALCT)	111033794	A/B	P	325	L
121	UniProt	VAR_068553	L	327	P	GALT_HUMAN	Disease (GALCT)	111033832	A/B	L	327	P
122	UniProt	VAR_002622	R	328	H	GALT_HUMAN	Disease (GALCT)	111033802	A/B	R	328	H
123	UniProt	VAR_002623	S	329	F	GALT_HUMAN	Disease (GALCT)	111033803	A/B	S	329	F
124	UniProt	VAR_002624	A	330	V	GALT_HUMAN	Disease (GALCT)	111033804	A/B	A	330	V
125	UniProt	VAR_002625	R	333	G	GALT_HUMAN	Disease (GALCT)	111033800	A/B	R	333	G
126	UniProt	VAR_068830	R	333	L	GALT_HUMAN	Disease (GALCT)	111033808	A/B	R	333	L
127	UniProt	VAR_002626	R	333	Q	GALT_HUMAN	Disease (GALCT)	111033808	A/B	R	333	Q
128	UniProt	VAR_002627	R	333	W	GALT_HUMAN	Disease (GALCT)	111033800	A/B	R	333	W
129	UniProt	VAR_002628	K	334	R	GALT_HUMAN	Disease (GALCT)	111033809	A/B	K	334	R
130	UniProt	VAR_002629	M	336	L	GALT_HUMAN	Disease (GALCT)	111033810	A/B	M	336	L
131	UniProt	VAR_068554	L	342	I	GALT_HUMAN	Disease (GALCT)	111033812	A/B	L	342	I
132	UniProt	VAR_002630	Q	344	K	GALT_HUMAN	Disease (GALCT)	111033814	A/B	Q	344	K
133	UniProt	VAR_068555	A	345	D	GALT_HUMAN	Disease (GALCT)	111033815	A/B	A	345	D
134	UniProt	VAR_002631	T	350	A	GALT_HUMAN	Disease (GALCT)	111033817	A/B	T	350	A

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Theoretical Model (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GAL_P_UDP_TRANSF_I	PS00117	Galactose-1-phosphate uridyl transferase family 1 active site signature.	GALT_HUMAN	171-188	2	A:171-188 B:171-188

Theoretical Model (11, 22)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.2c	ENST00000378842	2c	ENSE00001825305	chr9:34646660-34646783	124	GALT_HUMAN	1-28	28	2	A:21-28 B:21-28	8 8
1.2j	ENST00000378842	2j	ENSE00001657371	chr9:34647086-34647255	170	GALT_HUMAN	28-84	57	2	A:28-84 B:28-84	57 57
1.2n	ENST00000378842	2n	ENSE00000832949	chr9:34647489-34647564	76	GALT_HUMAN	85-110	26	2	A:85-110 B:85-110	26 26
1.2r	ENST00000378842	2r	ENSE00001238057	chr9:34647654-34647702	49	GALT_HUMAN	110-126	17	2	A:110-126 B:110-126	17 17
1.2t	ENST00000378842	2t	ENSE00000832947	chr9:34647829-34647958	130	GALT_HUMAN	126-169	44	2	A:126-169 B:126-169	44 44
1.2w	ENST00000378842	2w	ENSE00000832946	chr9:34648112-34648168	57	GALT_HUMAN	170-188	19	2	A:170-188 B:170-188	19 19
1.3b	ENST00000378842	3b	ENSE00001238041	chr9:34648331-34648453	123	GALT_HUMAN	189-229	41	2	A:189-229 B:189-229	41 41
1.3i	ENST00000378842	3i	ENSE00000832944	chr9:34648759-34648891	133	GALT_HUMAN	230-274	45	2	A:230-274 B:230-274	45 45
1.4a	ENST00000378842	4a	ENSE00001238122	chr9:34648995-34649078	84	GALT_HUMAN	274-302	29	2	A:274-302 B:274-302	29 29
1.4d	ENST00000378842	4d	ENSE00001238079	chr9:34649407-34649561	155	GALT_HUMAN	302-353	52	2	A:302-353 B:302-353	52 52
1.5c	ENST00000378842	5c	ENSE00001876755	chr9:34650366-34651032	667	GALT_HUMAN	354-379	26	2	A:354-379 B:354-379	26 26

Theoretical Model

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:359
 aligned with GALT_HUMAN | P07902 from UniProtKB/Swiss-Prot  Length:379

    Alignment length:359
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370         
           GALT_HUMAN    21 AATFRANDHQHIRYNPLQDEWVLVSAHRMKRPWQGQVEPQLLKTVPRHDPLNPLCPGAIRANGEVNPQYDSTFLFDNDFPALQPDAPSPGPSDHPLFQAKSARGVCKVMCFHPWSDVTLPLMSVPEIRAVVDAWASVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLPDIAQREERSQQAYKSQHGEPLLMEYSRQELLRKERLVLTSEHWLVLVPFWATWPYQTLLLPRRHVRRLPELTPAERDDLASIMKKLLTKYDNLFETSFPYSMGWHGAPTGSEAGANWNHWQLHAHYYPPLLRSATVRKFMVGYEMLAQAQRDLTPEQAAERLRALPEVHYHLGQKDRETATIA 379
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeee....eeeee..hhhhh.........................................eeee......................eee..eeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeee..hhhhh......eeeeeee...hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh..eeee...eeee..........eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee.................eeeee.............hhhhhhh..ee..hhhhhhhhhhhh.................. Sec.struct. author
             SAPs(SNPs) (1) --A----H---NHN---P-----LL-----L---C------M----C------P------T-V-----H-------SN----R--------RNL--SH----G-A-E-TY-Q--L--MP--KL----G-LA--G-----------ARL-TS---D---D-A-TQH--R---G-LP--MT-C-KP----C--H----P--K--S--PP-N-C------------S----R-CH-----CQ--P--A-R---DG-----N---V--N---F-K--Y-------------K-----D--H-QT--DSL-PHFV--GR-L-----I-KD----A----------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -------Y----P----------M------Q-----------------------------------------------------------------------Q--------Y--W------T-----Q--------------------------------F---L------N-----T--H-------S---------------------H-------------------S-------W-------V-----------------R---R-V-------------------------R-----H---------L---------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------------------------------------------------------------------------------------------V-----W------------------------------------S---------------------------------------------------------------------------------------------------------------------------------------------------Q---------------------------------------------- SAPs(SNPs) (3)
             SAPs(SNPs) (4) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W---------------------------------------------- SAPs(SNPs) (4)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAL_P_UDP_TRANSF_I----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.2c    --------------------------------------------------------Exon 1.2n  PDB: A:85-110  ---------------Exon 1.2t  PDB: A:126-169 UniProt: 126-169  Exon 1.2w          Exon 1.3b  PDB: A:189-229                Exon 1.3i  PDB: A:230-274 UniProt: 230-274   ---------------------------Exon 1.4d  PDB: A:302-353 UniProt: 302-353          Exon 1.5c  PDB: A:354-379  Transcript 1 (1)
           Transcript 1 (2) -------Exon 1.2j  PDB: A:28-84 UniProt: 28-84                   -------------------------Exon 1.2r        ---------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.4a  PDB: A:274-302    ----------------------------------------------------------------------------- Transcript 1 (2)
                 1r3a A  21 AATFRANDHQHIRYNPLQDEWVLVSAHRMKRPWQGQVEPQLLKTVPRHDPLNPLCPGAIRANGEVNPQYDSTFLFDNDFPALQPDAPSPGPSDHPLFQAKSARGVCKVMCFHPWSDVTLPLMSVPEIRAVVDAWASVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLPDIAQREERSQQAYKSQHGEPLLMEYSRQELLRKERLVLTSEHWLVLVPFWATWPYQTLLLPRRHVRRLPELTPAERDDLASIMKKLLTKYDNLFETSFPYSMGWHGAPTGSEAGANWNHWQLHAHYYPPLLRSATVRKFMVGYEMLAQAQRDLTPEQAAERLRALPEVHYHLGQKDRETATIA 379
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370

Chain B from PDB  Type:PROTEIN  Length:359
 aligned with GALT_HUMAN | P07902 from UniProtKB/Swiss-Prot  Length:379

    Alignment length:359
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370         
           GALT_HUMAN    21 AATFRANDHQHIRYNPLQDEWVLVSAHRMKRPWQGQVEPQLLKTVPRHDPLNPLCPGAIRANGEVNPQYDSTFLFDNDFPALQPDAPSPGPSDHPLFQAKSARGVCKVMCFHPWSDVTLPLMSVPEIRAVVDAWASVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLPDIAQREERSQQAYKSQHGEPLLMEYSRQELLRKERLVLTSEHWLVLVPFWATWPYQTLLLPRRHVRRLPELTPAERDDLASIMKKLLTKYDNLFETSFPYSMGWHGAPTGSEAGANWNHWQLHAHYYPPLLRSATVRKFMVGYEMLAQAQRDLTPEQAAERLRALPEVHYHLGQKDRETATIA 379
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeee....eeeee..hhhhh.........................................eeee......................eee..eeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeehhhhh......eeeeeee...hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh..eeee...eeee..........eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeee.................eeeee.............hhhhhhh..ee..hhhhhhhhhhhh.................. Sec.struct. author
             SAPs(SNPs) (1) --A----H---NHN---P-----LL-----L---C------M----C------P------T-V-----H-------SN----R--------RNL--SH----G-A-E-TY-Q--L--MP--KL----G-LA--G-----------ARL-TS---D---D-A-TQH--R---G-LP--MT-C-KP----C--H----P--K--S--PP-N-C------------S----R-CH-----CQ--P--A-R---DG-----N---V--N---F-K--Y-------------K-----D--H-QT--DSL-PHFV--GR-L-----I-KD----A----------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -------Y----P----------M------Q-----------------------------------------------------------------------Q--------Y--W------T-----Q--------------------------------F---L------N-----T--H-------S---------------------H-------------------S-------W-------V-----------------R---R-V-------------------------R-----H---------L---------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------------------------------------------------------------------------------------------V-----W------------------------------------S---------------------------------------------------------------------------------------------------------------------------------------------------Q---------------------------------------------- SAPs(SNPs) (3)
             SAPs(SNPs) (4) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W---------------------------------------------- SAPs(SNPs) (4)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------GAL_P_UDP_TRANSF_I----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.2c    --------------------------------------------------------Exon 1.2n  PDB: B:85-110  ---------------Exon 1.2t  PDB: B:126-169 UniProt: 126-169  Exon 1.2w          Exon 1.3b  PDB: B:189-229                Exon 1.3i  PDB: B:230-274 UniProt: 230-274   ---------------------------Exon 1.4d  PDB: B:302-353 UniProt: 302-353          Exon 1.5c  PDB: B:354-379  Transcript 1 (1)
           Transcript 1 (2) -------Exon 1.2j  PDB: B:28-84 UniProt: 28-84                   -------------------------Exon 1.2r        ---------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.4a  PDB: B:274-302    ----------------------------------------------------------------------------- Transcript 1 (2)
                 1r3a B  21 AATFRANDHQHIRYNPLQDEWVLVSAHRMKRPWQGQVEPQLLKTVPRHDPLNPLCPGAIRANGEVNPQYDSTFLFDNDFPALQPDAPSPGPSDHPLFQAKSARGVCKVMCFHPWSDVTLPLMSVPEIRAVVDAWASVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLPDIAQREERSQQAYKSQHGEPLLMEYSRQELLRKERLVLTSEHWLVLVPFWATWPYQTLLLPRRHVRRLPELTPAERDDLASIMKKLLTKYDNLFETSFPYSMGWHGAPTGSEAGANWNHWQLHAHYYPPLLRSATVRKFMVGYEMLAQAQRDLTPEQAAERLRALPEVHYHLGQKDRETATIA 379
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 1R3A)

(no "CATH Domain" information available for 1R3A)

(no "Pfam Domain" information available for 1R3A)

Theoretical Model(hide GO term definitions)

Chain A,B (GALT_HUMAN | P07902)

molecular function
	GO:0008108	UDP-glucose:hexose-1-phosphate uridylyltransferase activity	Catalysis of the reaction: alpha-D-galactose 1-phosphate + UDP-D-glucose = alpha-D-glucose 1-phosphate + UDP-D-galactose.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016779	nucleotidyltransferase activity	Catalysis of the transfer of a nucleotidyl group to a reactant.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0006258	UDP-glucose catabolic process	The chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0019388	galactose catabolic process	The chemical reactions and pathways resulting in the breakdown of galactose, the aldohexose galacto-hexose.
	GO:0006012	galactose metabolic process	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.
cellular component
	GO:0005794	Golgi apparatus	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Theoretical Model
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	1r3a
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	GALT_HUMAN \| P07902
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	2.7.7.12
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	GALT_HUMAN \| P07902
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	GALT_HUMAN \| P07902	:	5in3

(no "Related Entries Specified in the PDB File" available for 1R3A)

Description

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Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (134, 268)

PROSITE Motifs (1, 2)

Exons (11, 22)

Sequences/Alignments

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SCOP Domains (0, 0)

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Gene Ontology (13, 13)

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