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1QNE
Biol. Unit 1
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Asym.Unit (96 KB)
Biol.Unit 1 (48 KB)
Biol.Unit 2 (48 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ADENOVIRUS MAJOR LATE PROMOTER TATA BOX BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2).
Authors
:
J. L. Kim, S. K. Burley
Date
:
14 Oct 99 (Deposition) - 07 Feb 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,C,D (1x)
Biol. Unit 2: B,E,F (1x)
Keywords
:
Tata Box-Binding Protein (Tbp), Adenovirus Major Late Promoter (Admlp) Tata Box, Tbp-Tata Element Complex
(Keyword Search:
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)
Reference
:
G. A. Patikoglou, J. L. Kim, L. Sun, S. -H. Yang, T. Kodadek, S. K. Burley
Tata Element Recognition By The Tata Box-Binding Protein Has Been Conserved Throughout Evolution
Genes Dev. V. 13 3217 1999
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Hetero Components
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PROSITE Patterns/Profiles
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1: TFIID (A:52-101,A:143-192)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TFIID
PS00351
Transcription factor TFIID repeat signature.
TBP1_ARATH
52-101
143-192
2
A:52-101
-
A:143-192
-
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Exons
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1qnea1 (A:12-115)
1b: SCOP_d1qnea2 (A:116-198)
1c: SCOP_d1qneb1 (B:11-115)
1d: SCOP_d1qneb2 (B:116-198)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
TBP-like
(289)
Superfamily
:
TATA-box binding protein-like
(70)
Family
:
TATA-box binding protein (TBP), C-terminal domain
(29)
Protein domain
:
TATA-box binding protein (TBP), C-terminal domain
(29)
Thale cress (Arabidopsis thaliana) [TaxId: 3702]
(13)
1a
d1qnea1
A:12-115
1b
d1qnea2
A:116-198
1c
d1qneb1
B:11-115
1d
d1qneb2
B:116-198
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1qneA01 (A:19-29,A:116-197)
1b: CATH_1qneA02 (A:30-115)
1c: CATH_1qneB02 (B:30-115)
1d: CATH_1qneB01 (B:19-29,B:116-197)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
TATA-Binding Protein
(118)
Homologous Superfamily
:
TATA-Binding Protein
(37)
Mouse-ear cress (Arabidopsis thaliana)
(11)
1a
1qneA01
A:19-29,A:116-197
1b
1qneA02
A:30-115
1c
1qneB02
B:30-115
1d
1qneB01
B:19-29,B:116-197
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_TBP_1qneB01 (B:110-196)
1b: PFAM_TBP_1qneB02 (B:110-196)
1c: PFAM_TBP_1qneB03 (B:110-196)
1d: PFAM_TBP_1qneB04 (B:110-196)
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Clan
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TBP-like
(48)
Family
:
TBP
(22)
Arabidopsis thaliana (Mouse-ear cress)
(10)
1a
TBP-1qneB01
B:110-196
1b
TBP-1qneB02
B:110-196
1c
TBP-1qneB03
B:110-196
1d
TBP-1qneB04
B:110-196
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Asym.Unit (96 KB)
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