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1PG7
Biol. Unit 1
Info
Asym.Unit (276 KB)
Biol.Unit 1 (139 KB)
Biol.Unit 2 (139 KB)
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(1)
Title
:
MURINE 6A6 FAB IN COMPLEX WITH HUMANIZED ANTI-TISSUE FACTOR D3H44 FAB
Authors
:
C. Eigenbrot, Y. G. Meng, R. Krishnamurthy, M. T. Lipari, L. Presta, B. D T. Wong, P. Moran, S. Bullens, D. Kirchhofer
Date
:
27 May 03 (Deposition) - 26 Aug 03 (Release) - 05 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : H,I,L,M,W,X,Y,Z
Biol. Unit 1: H,L,W,X (1x)
Biol. Unit 2: I,M,Y,Z (1x)
Keywords
:
Immune System
(Keyword Search:
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Reference
:
C. Eigenbrot, Y. G. Meng, R. Krishnamurthy, M. T. Lipari, L. Presta, B. Devaux, T. Wong, P. Moran, S. Bullens, D. Kirchhofer
Structural Insight Into How An Anti-Idiotypic Antibody Against D3H44 (Anti-Tissue Factor Antibody) Restores Normal Coagulation.
J. Mol. Biol. V. 331 433 2003
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(8, 16)
Info
All SCOP Domains
1a: SCOP_d1pg7h2 (H:118-213)
1b: SCOP_d1pg7i2 (I:118-213)
2a: SCOP_d1pg7x2 (X:114-213)
2b: SCOP_d1pg7z2 (Z:114-213)
3a: SCOP_d1pg7l2 (L:108-213)
3b: SCOP_d1pg7m2 (M:108-213)
4a: SCOP_d1pg7w2 (W:109-206)
4b: SCOP_d1pg7y2 (Y:109-206)
5a: SCOP_d1pg7h1 (H:1-117)
5b: SCOP_d1pg7i1 (I:1-117)
6a: SCOP_d1pg7x1 (X:1-113)
6b: SCOP_d1pg7z1 (Z:1-113)
7a: SCOP_d1pg7l1 (L:1-107)
7b: SCOP_d1pg7m1 (M:1-107)
8a: SCOP_d1pg7w1 (W:1-108)
8b: SCOP_d1pg7y1 (Y:1-108)
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Classes
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Folds
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma
(608)
Human (Homo sapiens) [TaxId: 9606]
(179)
1a
d1pg7h2
H:118-213
1b
d1pg7i2
I:118-213
Mouse (Mus musculus) [TaxId: 10090]
(414)
2a
d1pg7x2
X:114-213
2b
d1pg7z2
Z:114-213
Protein domain
:
Immunoglobulin light chain kappa constant domain, CL-kappa
(495)
Human (Homo sapiens) [TaxId: 9606]
(144)
3a
d1pg7l2
L:108-213
3b
d1pg7m2
M:108-213
Protein domain
:
Immunoglobulin light chain lambda constant domain, CL-lambda
(68)
Human (Homo sapiens) [TaxId: 9606]
(46)
4a
d1pg7w2
W:109-206
4b
d1pg7y2
Y:109-206
Family
:
V set domains (antibody variable domain-like)
(1919)
Protein domain
:
Immunoglobulin heavy chain variable domain, VH
(658)
Engineered (including hybrid species)
(68)
5a
d1pg7h1
H:1-117
5b
d1pg7i1
I:1-117
Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
(177)
6a
d1pg7x1
X:1-113
6b
d1pg7z1
Z:1-113
Protein domain
:
Immunoglobulin light chain kappa variable domain, VL-kappa
(616)
Engineered (including hybrid species)
(61)
7a
d1pg7l1
L:1-107
7b
d1pg7m1
M:1-107
Protein domain
:
Immunoglobulin light chain lambda variable domain, VL-lambda
(89)
Mouse (Mus musculus) [TaxId: 10090]
(35)
8a
d1pg7w1
W:1-108
8b
d1pg7y1
Y:1-108
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CATH Domains
(1, 16)
Info
all CATH domains
1a: CATH_1pg7L02 (L:109-211)
1b: CATH_1pg7M02 (M:109-211)
1c: CATH_1pg7X01 (X:1-113)
1d: CATH_1pg7Z01 (Z:1-113)
1e: CATH_1pg7W02 (W:109-206)
1f: CATH_1pg7Y02 (Y:109-206)
1g: CATH_1pg7H01 (H:1-113)
1h: CATH_1pg7I01 (I:1-113)
1i: CATH_1pg7L01 (L:1-108)
1j: CATH_1pg7M01 (M:1-108)
1k: CATH_1pg7X02 (X:114-212)
1l: CATH_1pg7Z02 (Z:114-212)
1m: CATH_1pg7H02 (H:114-212)
1n: CATH_1pg7I02 (I:114-212)
1o: CATH_1pg7W01 (W:1-108)
1p: CATH_1pg7Y01 (Y:1-108)
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Synthetic construct. Organism_taxid: 32630.
(1)
1a
1pg7L02
L:109-211
1b
1pg7M02
M:109-211
1c
1pg7X01
X:1-113
1d
1pg7Z01
Z:1-113
1e
1pg7W02
W:109-206
1f
1pg7Y02
Y:109-206
1g
1pg7H01
H:1-113
1h
1pg7I01
I:1-113
1i
1pg7L01
L:1-108
1j
1pg7M01
M:1-108
1k
1pg7X02
X:114-212
1l
1pg7Z02
Z:114-212
1m
1pg7H02
H:114-212
1n
1pg7I02
I:114-212
1o
1pg7W01
W:1-108
1p
1pg7Y01
Y:1-108
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (276 KB)
Header - Asym.Unit
Biol.Unit 1 (139 KB)
Header - Biol.Unit 1
Biol.Unit 2 (139 KB)
Header - Biol.Unit 2
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