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1P0Z
Biol. Unit 9
Info
Asym.Unit (265 KB)
Biol.Unit 1 (31 KB)
Biol.Unit 10 (30 KB)
Biol.Unit 2 (31 KB)
Biol.Unit 3 (32 KB)
Biol.Unit 4 (31 KB)
Biol.Unit 5 (31 KB)
Biol.Unit 6 (31 KB)
Biol.Unit 7 (30 KB)
Biol.Unit 8 (30 KB)
Biol.Unit 9 (30 KB)
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(1)
Title
:
SENSOR KINASE CITA BINDING DOMAIN
Authors
:
S. Reinelt, E. Hofmann, T. Gerharz, M. Bott, D. R. Madden
Date
:
11 Apr 03 (Deposition) - 19 Aug 03 (Release) - 10 Sep 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Biol. Unit 9: I (1x)
Biol. Unit 10: J (1x)
Keywords
:
Transferase, Kinase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Reinelt, E. Hofmann, T. Gerharz, M. Bott, D. R. Madden
The Structure Of The Periplasmic Ligand-Binding Domain Of The Sensor Kinase Cita Reveals The First Extracellular Pas Domain.
J. Biol. Chem. V. 278 39189 2003
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: CITRATE ANION (FLCa)
1b: CITRATE ANION (FLCb)
1c: CITRATE ANION (FLCc)
1d: CITRATE ANION (FLCd)
1e: CITRATE ANION (FLCe)
1f: CITRATE ANION (FLCf)
1g: CITRATE ANION (FLCg)
1h: CITRATE ANION (FLCh)
1i: CITRATE ANION (FLCi)
1j: CITRATE ANION (FLCj)
2a: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7a)
2b: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7b)
2c: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7c)
2d: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7d)
2e: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7e)
2f: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7f)
2g: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7g)
2h: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7h)
2i: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7i)
2j: BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(... (MO7j)
3a: SODIUM ION (NAa)
3b: SODIUM ION (NAb)
3c: SODIUM ION (NAc)
3d: SODIUM ION (NAd)
3e: SODIUM ION (NAe)
3f: SODIUM ION (NAf)
3g: SODIUM ION (NAg)
3h: SODIUM ION (NAh)
3i: SODIUM ION (NAi)
3j: SODIUM ION (NAj)
4a: MO(VI)(=O)(OH)2 CLUSTER (OMOa)
4b: MO(VI)(=O)(OH)2 CLUSTER (OMOb)
4c: MO(VI)(=O)(OH)2 CLUSTER (OMOc)
4d: MO(VI)(=O)(OH)2 CLUSTER (OMOd)
4e: MO(VI)(=O)(OH)2 CLUSTER (OMOe)
4f: MO(VI)(=O)(OH)2 CLUSTER (OMOf)
4g: MO(VI)(=O)(OH)2 CLUSTER (OMOg)
4h: MO(VI)(=O)(OH)2 CLUSTER (OMOh)
4i: MO(VI)(=O)(OH)2 CLUSTER (OMOi)
4j: MO(VI)(=O)(OH)2 CLUSTER (OMOj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FLC
1
Ligand/Ion
CITRATE ANION
2
MO7
1
Ligand/Ion
BIS(MU4-OXO)-BIS(MU3-OXO)-OCTAKIS(MU2-OXO)-DODECAOXO-HEPTAMOLYBDENUM (VI)
3
NA
-1
Ligand/Ion
SODIUM ION
4
OMO
1
Ligand/Ion
MO(VI)(=O)(OH)2 CLUSTER
[
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]
Sites
(6, 6)
Info
All Sites
1: BC8 (SOFTWARE)
2: BC9 (SOFTWARE)
3: CC3 (SOFTWARE)
4: DC8 (SOFTWARE)
5: EC1 (SOFTWARE)
6: EC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
BC8
SOFTWARE
TYR I:56 , THR I:58 , ARG I:66 , HIS I:69 , MET I:79 , GLY I:100 , SER I:101 , LEU I:102 , ARG I:107 , LYS I:109 , SER I:124 , OMO I:1663 , HOH I:1674 , HOH I:1690
BINDING SITE FOR RESIDUE FLC I 1664
2
BC9
SOFTWARE
SER I:24 , SER I:110 , PRO I:111 , HOH I:1675 , HOH I:1678 , HOH I:1686
BINDING SITE FOR RESIDUE NA I 1665
3
CC3
SOFTWARE
ARG A:7 , HIS A:9 , TYR A:10 , GLN A:11 , VAL A:12 , GLU A:133 , HIS A:134 , HIS A:135 , HOH A:1705 , HOH A:1726 , HOH A:1744 , HOH A:1782 , HOH A:1803 , HIS D:135 , LYS I:92 , HOH I:1668
BINDING SITE FOR RESIDUE MO7 A 1630
4
DC8
SOFTWARE
LYS B:92 , HOH B:1643 , ARG H:7 , HIS H:9 , TYR H:10 , GLN H:11 , VAL H:12 , GLU H:133 , HIS H:134 , HIS H:135 , HOH H:1718 , HOH H:1719 , HOH H:1735 , HIS I:134 , HIS I:135
BINDING SITE FOR RESIDUE MO7 H 1658
5
EC1
SOFTWARE
LYS A:92 , HOH A:1646 , HOH A:1725 , HIS H:135 , HOH H:1778 , ARG I:7 , HIS I:9 , TYR I:10 , GLN I:11 , VAL I:12 , GLU I:133 , HIS I:134 , HIS I:135 , HOH I:1732 , HOH I:1734 , HOH I:1740
BINDING SITE FOR RESIDUE MO7 I 1662
6
EC2
SOFTWARE
MET I:79 , GLU I:80 , GLY I:81 , ASP I:83 , ARG I:98 , ARG I:107 , FLC I:1664 , HOH I:1683 , HOH I:1690 , HOH I:1694
BINDING SITE FOR RESIDUE OMO I 1663
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d1p0za_ (A:)
1b: SCOP_d1p0zb_ (B:)
1c: SCOP_d1p0zc_ (C:)
1d: SCOP_d1p0zd_ (D:)
1e: SCOP_d1p0ze_ (E:)
1f: SCOP_d1p0zf_ (F:)
1g: SCOP_d1p0zg_ (G:)
1h: SCOP_d1p0zh_ (H:)
1i: SCOP_d1p0zi_ (I:)
1j: SCOP_d1p0zj_ (J:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Profilin-like
(304)
Superfamily
:
Sensory domain-like
(15)
Family
:
Sensory domain of two-component sensor kinase
(5)
Protein domain
:
Sensor kinase CitA
(1)
Klebsiella pneumoniae [TaxId: 573]
(1)
1a
d1p0za_
A:
1b
d1p0zb_
B:
1c
d1p0zc_
C:
1d
d1p0zd_
D:
1e
d1p0ze_
E:
1f
d1p0zf_
F:
1g
d1p0zg_
G:
1h
d1p0zh_
H:
1i
d1p0zi_
I:
1j
d1p0zj_
J:
[
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CATH Domains
(1, 10)
Info
all CATH domains
1a: CATH_1p0zA00 (A:5-135)
1b: CATH_1p0zB00 (B:5-135)
1c: CATH_1p0zC00 (C:5-135)
1d: CATH_1p0zD00 (D:5-135)
1e: CATH_1p0zE00 (E:5-135)
1f: CATH_1p0zF00 (F:5-135)
1g: CATH_1p0zG00 (G:5-135)
1h: CATH_1p0zH00 (H:5-135)
1i: CATH_1p0zI00 (I:5-135)
1j: CATH_1p0zJ00 (J:5-135)
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)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Beta-Lactamase
(202)
Homologous Superfamily
:
[code=3.30.450.20, no name defined]
(117)
Klebsiella pneumoniae. Organism_taxid: 573.
(1)
1a
1p0zA00
A:5-135
1b
1p0zB00
B:5-135
1c
1p0zC00
C:5-135
1d
1p0zD00
D:5-135
1e
1p0zE00
E:5-135
1f
1p0zF00
F:5-135
1g
1p0zG00
G:5-135
1h
1p0zH00
H:5-135
1i
1p0zI00
I:5-135
1j
1p0zJ00
J:5-135
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (265 KB)
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Biol.Unit 10 (30 KB)
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Biol.Unit 2 (31 KB)
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Biol.Unit 3 (32 KB)
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Biol.Unit 4 (31 KB)
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