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Asym. Unit
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Asym.Unit (26 KB)
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(1)
Title
:
SOLUTION STRUCTURE OF UBL5 A HUMAN UBIQUITIN-LIKE PROTEIN
Authors
:
T. Mcnally, Q. Huang, R. S. Janis, Z. Liu, E. T. Olejniczak, R. M. Reilly
Date
:
10 Apr 03 (Deposition) - 28 Oct 03 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A
Keywords
:
Ubiquitin-Like Fold, Protein Binding
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
T. Mcnally, Q. Huang, R. S. Janis, Z. Liu, E. T. Olejniczak, R. M. Reilly
Structural Analysis Of Ubl5, A Novel Ubiquitin-Like Modifier
Protein Sci. V. 12 1562 2003
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(4, 4)
Info
All Exons
Exon 1.2 (A:1-19)
Exon 1.3 (A:19-47)
Exon 1.4 (A:47-60)
Exon 1.5 (A:60-73)
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All Exon Boundaries
1: Boundary 1.1b/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000358666
1b
ENSE00001432662
chr19:
9938568-9938740
173
UBL5_HUMAN
-
0
0
-
-
1.2
ENST00000358666
2
ENSE00000896864
chr19:
9939003-9939069
67
UBL5_HUMAN
1-19
19
1
A:1-19
19
1.3
ENST00000358666
3
ENSE00000896867
chr19:
9939268-9939351
84
UBL5_HUMAN
19-47
29
1
A:19-47
29
1.4
ENST00000358666
4
ENSE00000896869
chr19:
9939513-9939550
38
UBL5_HUMAN
47-60
14
1
A:47-60
14
1.5
ENST00000358666
5
ENSE00001136234
chr19:
9940641-9940797
157
UBL5_HUMAN
60-73
14
1
A:60-73
14
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d1p0ra_ (A:)
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Protein Domains
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(
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Organisms
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)
(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
Ubiquitin-like
(546)
Family
:
Ubiquitin-related
(337)
Protein domain
:
Ubiquitin-like protein 5, ubl5
(2)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1p0ra_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1p0rA00 (A:1-73)
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Ubiquitin-like (UB roll)
(674)
Homologous Superfamily
:
Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1
(286)
Human (Homo sapiens)
(177)
1a
1p0rA00
A:1-73
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_ubiquitin_1p0rA01 (A:8-73)
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Clan
:
Ubiquitin
(279)
Family
:
ubiquitin
(99)
Homo sapiens (Human)
(67)
1a
ubiquitin-1p0rA01
A:8-73
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Asymmetric Unit 1
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