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1OV8
Biol. Unit 5
Info
Asym.Unit (100 KB)
Biol.Unit 1 (25 KB)
Biol.Unit 2 (26 KB)
Biol.Unit 3 (25 KB)
Biol.Unit 4 (26 KB)
Biol.Unit 5 (48 KB)
Biol.Unit 6 (49 KB)
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(1)
Title
:
AURACYANIN B STRUCTURE IN SPACE GROUP, P65
Authors
:
M. Lee, M. J. Maher, H. C. Freeman, J. M. Guss
Date
:
25 Mar 03 (Deposition) - 09 Sep 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: C,D (1x)
Biol. Unit 6: A,B (1x)
Keywords
:
Electron Transport
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Reference
:
M. Lee, M. J. Maher, H. C. Freeman, J. M. Guss
Auracyanin B Structure In Space Group P6(5).
Acta Crystallogr. , Sect. D V. 59 1545 2003
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
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Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
CU
-1
Ligand/Ion
COPPER (II) ION
3
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(6, 6)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC6 (SOFTWARE)
4: AC7 (SOFTWARE)
5: AC9 (SOFTWARE)
6: BC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
GLN C:56 , HIS C:57 , CYS C:122 , HIS C:127 , MET C:132
BINDING SITE FOR RESIDUE CU C 152
2
AC4
SOFTWARE
GLN D:56 , HIS D:57 , CYS D:122 , HIS D:127 , MET D:132
BINDING SITE FOR RESIDUE CU D 153
3
AC6
SOFTWARE
HIS C:127 , HOH C:449 , VAL D:55 , HIS D:127 , HOH D:577
BINDING SITE FOR RESIDUE CL C 155
4
AC7
SOFTWARE
GLY C:65 , ASP C:67 , VAL C:68
BINDING SITE FOR RESIDUE SO4 C 160
5
AC9
SOFTWARE
GLY D:64 , GLY D:65 , ASP D:67 , VAL D:68
BINDING SITE FOR RESIDUE SO4 D 162
6
BC2
SOFTWARE
ARG A:44 , HOH A:255 , HOH A:599 , ARG B:44 , HOH B:379 , HOH B:471 , ARG C:44 , HOH C:316 , HOH C:534 , ARG D:44 , HOH D:192 , HOH D:662
BINDING SITE FOR RESIDUE SO4 B 164
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: COPPER_BLUE (C:116-132,D:116-132)
2: MULTICOPPER_OXIDASE1 (C:116-136,D:116-136)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
COPPER_BLUE
PS00196
Type-1 copper (blue) proteins signature.
AURB_CHLAA
211-227
2
-
-
C:116-132
D:116-132
2
MULTICOPPER_OXIDASE1
PS00079
Multicopper oxidases signature 1.
AURB_CHLAA
211-231
2
-
-
C:116-136
D:116-136
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1ov8a_ (A:)
1b: SCOP_d1ov8b_ (B:)
1c: SCOP_d1ov8c_ (C:)
1d: SCOP_d1ov8d_ (D:)
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Protein Domains
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(
)
Organisms
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)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Cupredoxin-like
(545)
Superfamily
:
Cupredoxins
(543)
Family
:
Plastocyanin/azurin-like
(241)
Protein domain
:
Auracyanin
(2)
Chloroflexus aurantiacus [TaxId: 1108]
(2)
1a
d1ov8a_
A:
1b
d1ov8b_
B:
1c
d1ov8c_
C:
1d
d1ov8d_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1ov8A00 (A:2-140)
1b: CATH_1ov8B00 (B:2-140)
1c: CATH_1ov8C00 (C:2-140)
1d: CATH_1ov8D00 (D:2-140)
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)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Cupredoxins - blue copper proteins
(420)
Chloroflexus aurantiacus. Organism_taxid: 1108.
(2)
1a
1ov8A00
A:2-140
1b
1ov8B00
B:2-140
1c
1ov8C00
C:2-140
1d
1ov8D00
D:2-140
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Copper_bind_1ov8D01 (D:17-139)
1b: PFAM_Copper_bind_1ov8D02 (D:17-139)
1c: PFAM_Copper_bind_1ov8D03 (D:17-139)
1d: PFAM_Copper_bind_1ov8D04 (D:17-139)
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Clan
:
CU_oxidase
(192)
Family
:
Copper-bind
(82)
Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
(2)
1a
Copper-bind-1ov8D01
D:17-139
1b
Copper-bind-1ov8D02
D:17-139
1c
Copper-bind-1ov8D03
D:17-139
1d
Copper-bind-1ov8D04
D:17-139
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Asymmetric Unit 1
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