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1ONF
Biol. Unit 1
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Asym.Unit (157 KB)
Biol.Unit 1 (298 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM GLUTATHIONE REDUCTASE
Authors
:
G. N. Sarma, S. N. Savvides, K. Becker, M. Schirmer, R. H. Schirmer, P. A.
Date
:
27 Feb 03 (Deposition) - 06 May 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
G. N. Sarma, S. N. Savvides, K. Becker, M. Schirmer, R. H. Schirmer, P. A. Karplus
Glutathione Reductase Of The Malarial Parasite Plasmodium Falciparum: Crystal Structure And Inhibitor Development
J. Mol. Biol. V. 328 893 2003
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
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No.
Name
Count
Type
Full Name
1
FAD
2
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:8 , GLY A:9 , GLY A:10 , SER A:11 , GLY A:12 , GLU A:31 , LYS A:32 , THR A:38 , CYS A:39 , VAL A:42 , GLY A:43 , CYS A:44 , LYS A:47 , GLY A:108 , THR A:109 , ALA A:110 , ALA A:147 , VAL A:148 , GLY A:149 , SER A:166 , TYR A:185 , ARG A:272 , ASP A:275 , GLY A:310 , ASP A:311 , GLN A:351 , LEU A:352 , THR A:353 , PRO A:354 , HIS A:484
BINDING SITE FOR RESIDUE FAD A 500
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: PYRIDINE_REDOX_1 (A:36-46)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PYRIDINE_REDOX_1
PS00076
Pyridine nucleotide-disulphide oxidoreductases class-I active site.
GSHR_PLAFK
37-47
2
A:36-46
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 3)
Info
All SCOP Domains
1a: SCOP_d1onfa3 (A:377-495)
2a: SCOP_d1onfa1 (A:1-153,A:271-376)
2b: SCOP_d1onfa2 (A:154-270)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
CO dehydrogenase flavoprotein C-domain-like
(111)
Superfamily
:
FAD/NAD-linked reductases, dimerisation (C-terminal) domain
(76)
Family
:
FAD/NAD-linked reductases, dimerisation (C-terminal) domain
(76)
Protein domain
:
Glutathione reductase
(27)
Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
(1)
1a
d1onfa3
A:377-495
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
FAD/NAD(P)-binding domain
(331)
Superfamily
:
FAD/NAD(P)-binding domain
(331)
Family
:
FAD/NAD-linked reductases, N-terminal and central domains
(92)
Protein domain
:
Glutathione reductase
(27)
Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
(1)
2a
d1onfa1
A:1-153,A:271-376
2b
d1onfa2
A:154-270
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CATH Domains
(2, 3)
Info
all CATH domains
1a: CATH_1onfA03 (A:379-493)
2a: CATH_1onfA01 (A:1-152,A:271-378)
2b: CATH_1onfA02 (A:153-270)
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Organisms
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Enolase-like; domain 1
(252)
Homologous Superfamily
:
[code=3.30.390.30, no name defined]
(99)
Malaria parasite p (Plasmodium falciparum)
(1)
1a
1onfA03
A:379-493
Architecture
:
3-Layer(bba) Sandwich
(528)
Topology
:
FAD/NAD(P)-binding domain
(373)
Homologous Superfamily
:
[code=3.50.50.60, no name defined]
(373)
Malaria parasite p (Plasmodium falciparum)
(1)
2a
1onfA01
A:1-152,A:271-378
2b
1onfA02
A:153-270
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Pfam Domains
(3, 3)
Info
all PFAM domains
1a: PFAM_Pyr_redox_1onfA01 (A:177-257)
2a: PFAM_Pyr_redox_2_1onfA02 (A:3-316)
3a: PFAM_Pyr_redox_dim_1onfA03 (A:380-495)
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Organisms
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)
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)
Clan
:
NADP_Rossmann
(1239)
Family
:
Pyr_redox
(62)
Plasmodium falciparum (isolate K1 / Thailand)
(1)
1a
Pyr_redox-1onfA01
A:177-257
Family
:
Pyr_redox_2
(69)
Plasmodium falciparum (isolate K1 / Thailand)
(1)
2a
Pyr_redox_2-1onfA02
A:3-316
Clan
:
no clan defined [family: Pyr_redox_dim]
(44)
Family
:
Pyr_redox_dim
(44)
Plasmodium falciparum (isolate K1 / Thailand)
(1)
3a
Pyr_redox_dim-1onfA03
A:380-495
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